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D7AFU0

- D7AFU0_GEOSK

UniProt

D7AFU0 - D7AFU0_GEOSK

Protein
Submitted name:

Cytochrome c, 3 heme-binding sites

Gene

ppcA

Organism
Geobacter sulfurreducens (strain DL-1 / KN400)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi37 – 371Iron (heme 1 axial ligand); via tele nitrogenImported
    Metal bindingi40 – 401Iron (heme 3 axial ligand); via tele nitrogenImported
    Binding sitei47 – 471Heme 1 (covalent)Imported
    Binding sitei50 – 501Heme 1 (covalent)Imported
    Metal bindingi51 – 511Iron (heme 1 axial ligand); via tele nitrogenImported
    Metal bindingi67 – 671Iron (heme 2 axial ligand); via tele nitrogenImported
    Binding sitei71 – 711Heme 3 (covalent)Imported
    Binding sitei74 – 741Heme 3 (covalent)Imported
    Metal bindingi75 – 751Iron (heme 3 axial ligand); via tele nitrogenImported
    Binding sitei85 – 851Heme 2 (covalent)Imported
    Binding sitei88 – 881Heme 2 (covalent)Imported
    Metal bindingi89 – 891Iron (heme 2 axial ligand); via tele nitrogenImported

    GO - Molecular functioni

    1. electron carrier activity Source: InterPro
    2. heme binding Source: InterPro
    3. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    HemeImported, Iron, Metal-binding

    Enzyme and pathway databases

    BioCyciGSUL663917:GLDN-590-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cytochrome c, 3 heme-binding sitesImported
    Gene namesi
    Name:ppcAImported
    Ordered Locus Names:KN400_0591Imported
    OrganismiGeobacter sulfurreducens (strain DL-1 / KN400)Imported
    Taxonomic identifieri663917 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
    ProteomesiUP000000389: Chromosome

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2LZZNMR-A21-91[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000136348.

    Family and domain databases

    InterProiIPR002322. Cyt_c_III.
    IPR029467. Cytochrome_c3/c7.
    [Graphical view]
    PfamiPF14522. Cytochrome_C7. 1 hit.
    [Graphical view]
    PRINTSiPR00609. CYTOCHROMEC3.

    Sequencei

    Sequence statusi: Complete.

    D7AFU0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKVIASLAL SVFCAGLAFA ADDIVLKAKN GDVKFPHKAH QKAVPDCKKC   50
    HEKGPGKIEG FGKEMAHGKG CKGCHEEMKK GPTKCGECHK K 91
    Length:91
    Mass (Da):9,748
    Last modified:August 10, 2010 - v1
    Checksum:iC87AB91F7834E086
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002031 Genomic DNA. Translation: ADI83454.1.
    RefSeqiWP_010941274.1. NC_017454.1.
    YP_006889630.1. NC_017454.1.

    Genome annotation databases

    EnsemblBacteriaiADI83454; ADI83454; KN400_0591.
    GeneIDi12441236.
    KEGGigsk:KN400_0591.
    PATRICi43025198. VBIGeoSul143269_0597.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002031 Genomic DNA. Translation: ADI83454.1 .
    RefSeqi WP_010941274.1. NC_017454.1.
    YP_006889630.1. NC_017454.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2LZZ NMR - A 21-91 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADI83454 ; ADI83454 ; KN400_0591 .
    GeneIDi 12441236.
    KEGGi gsk:KN400_0591.
    PATRICi 43025198. VBIGeoSul143269_0597.

    Phylogenomic databases

    HOGENOMi HOG000136348.

    Enzyme and pathway databases

    BioCyci GSUL663917:GLDN-590-MONOMER.

    Family and domain databases

    InterProi IPR002322. Cyt_c_III.
    IPR029467. Cytochrome_c3/c7.
    [Graphical view ]
    Pfami PF14522. Cytochrome_C7. 1 hit.
    [Graphical view ]
    PRINTSi PR00609. CYTOCHROMEC3.
    ProtoNeti Search...

    Publicationsi

    1. "De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads."
      Nagarajan H., Butler J.E., Klimes A., Qiu Y., Zengler K., Ward J., Young N.D., Methe B.A., Palsson B.O., Lovley D.R., Barrett C.L.
      PLoS ONE 5:E10922-E10922(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DL-1 / KN400Imported.
    2. "Solution structure of a mutant of the triheme cytochrome PpcA from Geobacter sulfurreducens sheds light on the role of the conserved aromatic residue F15."
      Dantas J.M., Morgado L., Pokkuluri P.R., Turner D.L., Salgueiro C.A.
      Biochim. Biophys. Acta 1827:484-492(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY NMR OF 21-91 IN COMPLEX WITH HEME.

    Entry informationi

    Entry nameiD7AFU0_GEOSK
    AccessioniPrimary (citable) accession number: D7AFU0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3