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D7AFU0

- D7AFU0_GEOSK

UniProt

D7AFU0 - D7AFU0_GEOSK

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Protein
Submitted name:

Cytochrome c, 3 heme-binding sites

Gene

ppcA

Organism
Geobacter sulfurreducens (strain DL-1 / KN400)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi37 – 371Iron (heme 1 axial ligand); via tele nitrogenImported
Metal bindingi40 – 401Iron (heme 3 axial ligand); via tele nitrogenImported
Binding sitei47 – 471Heme 1 (covalent)Imported
Binding sitei50 – 501Heme 1 (covalent)Imported
Metal bindingi51 – 511Iron (heme 1 axial ligand); via tele nitrogenImported
Metal bindingi67 – 671Iron (heme 2 axial ligand); via tele nitrogenImported
Binding sitei71 – 711Heme 3 (covalent)Imported
Binding sitei74 – 741Heme 3 (covalent)Imported
Metal bindingi75 – 751Iron (heme 3 axial ligand); via tele nitrogenImported
Binding sitei85 – 851Heme 2 (covalent)Imported
Binding sitei88 – 881Heme 2 (covalent)Imported
Metal bindingi89 – 891Iron (heme 2 axial ligand); via tele nitrogenImported

GO - Molecular functioni

  1. electron carrier activity Source: InterPro
  2. heme binding Source: InterPro
  3. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

HemeImported, Iron, Metal-binding

Enzyme and pathway databases

BioCyciGSUL663917:GLDN-590-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c, 3 heme-binding sitesImported
Gene namesi
Name:ppcAImported
Ordered Locus Names:KN400_0591Imported
OrganismiGeobacter sulfurreducens (strain DL-1 / KN400)Imported
Taxonomic identifieri663917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000000389: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2LZZNMR-A21-91[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000136348.

Family and domain databases

InterProiIPR002322. Cyt_c_III.
IPR029467. Cytochrome_c3/c7.
[Graphical view]
PfamiPF14522. Cytochrome_C7. 1 hit.
[Graphical view]
PRINTSiPR00609. CYTOCHROMEC3.

Sequencei

Sequence statusi: Complete.

D7AFU0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKVIASLAL SVFCAGLAFA ADDIVLKAKN GDVKFPHKAH QKAVPDCKKC
60 70 80 90
HEKGPGKIEG FGKEMAHGKG CKGCHEEMKK GPTKCGECHK K
Length:91
Mass (Da):9,748
Last modified:August 10, 2010 - v1
Checksum:iC87AB91F7834E086
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002031 Genomic DNA. Translation: ADI83454.1.
RefSeqiYP_006889630.1. NC_017454.1.

Genome annotation databases

EnsemblBacteriaiADI83454; ADI83454; KN400_0591.
GeneIDi12441236.
KEGGigsk:KN400_0591.
PATRICi43025198. VBIGeoSul143269_0597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002031 Genomic DNA. Translation: ADI83454.1 .
RefSeqi YP_006889630.1. NC_017454.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2LZZ NMR - A 21-91 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI83454 ; ADI83454 ; KN400_0591 .
GeneIDi 12441236.
KEGGi gsk:KN400_0591.
PATRICi 43025198. VBIGeoSul143269_0597.

Phylogenomic databases

HOGENOMi HOG000136348.

Enzyme and pathway databases

BioCyci GSUL663917:GLDN-590-MONOMER.

Family and domain databases

InterProi IPR002322. Cyt_c_III.
IPR029467. Cytochrome_c3/c7.
[Graphical view ]
Pfami PF14522. Cytochrome_C7. 1 hit.
[Graphical view ]
PRINTSi PR00609. CYTOCHROMEC3.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads."
    Nagarajan H., Butler J.E., Klimes A., Qiu Y., Zengler K., Ward J., Young N.D., Methe B.A., Palsson B.O., Lovley D.R., Barrett C.L.
    PLoS ONE 5:E10922-E10922(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DL-1 / KN400Imported.
  2. "Solution structure of a mutant of the triheme cytochrome PpcA from Geobacter sulfurreducens sheds light on the role of the conserved aromatic residue F15."
    Dantas J.M., Morgado L., Pokkuluri P.R., Turner D.L., Salgueiro C.A.
    Biochim. Biophys. Acta 1827:484-492(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 21-91 IN COMPLEX WITH HEME.

Entry informationi

Entry nameiD7AFU0_GEOSK
AccessioniPrimary (citable) accession number: D7AFU0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3