D7AAR4 (D7AAR4_STAND) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-bisphosphate carboxylase EMBL ADH90931.1
EC=4.1.1.39 EMBL ADH90931.1

Gene names

Ordered Locus Names:

Snov_3661 EMBL ADH90931.1

Organism

Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) [Complete proteome] [HAMAP] EMBL ADH90931.1

Taxonomic identifier

639283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Starkeya › Starkeya novella

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ADH90931.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7AAR4 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: F5A65C63C7D6C874	FASTA	420	44,990
	10 20 30 40 50 60 MPPLSRIEAD YLIETAYDPR AAAEAMAGEQ SSGTFVPVPG ETPELKERSA ARIEALEIVD 70 80 90 100 110 120 TVEAPSLPGA GHPKGEAPIR RARVTLSWPL DNLGPSLPNL MATVAGNLFE LKQFSGLRLL 130 140 150 160 170 180 DIRLPHAFAD AYGGPKFGVA GTRRLAGVEG RPLIGTIVKP SVGFGPQETA DLVELLAEGG 190 200 210 220 230 240 IDFVKDDELQ SDGPHCPFEE RVRAVMRVVN DHADRTGRKV MFAFNITGEL DQMRRRHDVV 250 260 270 280 290 300 LQHGGTCVMA SLNSVGLVGM VELGRFTELP IHAHRNGWGY LSRAPMLGWS YVAWQKIWRL 310 320 330 340 350 360 AGADHMHVNG LSNKFSEADD SVIASARECL TPLFEDKPCI AMPVFSSGQS AKQAPGTYAA 370 380 390 400 410 420 LGSPDLIFAA GGGIMAHPDG PAAGVASLRE AWEAAMASVP LADYARDHTA LARALETYAV

References

[1]

"Complete sequence of Starkeya novella DSM 506." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U., Woyke T. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002026 Genomic DNA. Translation: ADH90931.1.
RefSeq	YP_003695550.1. NC_014217.1.
3D structure databases
ProteinModelPortal	D7AAR4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADH90931; ADH90931; Snov_3661.
GeneID	9334754.
KEGG	sno:Snov_3661.
PATRIC	38259927. VBIStaNov45716_3664.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7AAR4_STAND

Accession

Primary (citable) accession number: D7AAR4

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)