D7A723 (D7A723_STAND) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr
Ordered Locus Names:	Snov_1077 EMBL ADH88397.1

Organism

Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) [Complete proteome] [HAMAP] EMBL ADH88397.1

Taxonomic identifier

639283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Starkeya › Starkeya novella

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADH88397.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7A723 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 80162263940469A6	FASTA	374	39,853
	10 20 30 40 50 60 MTDRDIPLNE AGGVLTIDLS ALAANFRDVA ARVAPAKCAA VVKGDAYGLG LVPTASTLWH 70 80 90 100 110 120 AGARTFFVAL LSEARKLREL LPDAEIFVLN GLFPGTEATY QQHALLPVLG SVPEIERWQQ 130 140 150 160 170 180 FCERTGEPLP AALHVDTGMN RLGLSAAEAV NVAEGRDELG FPLALLMSHL ACADEPGHPL 190 200 210 220 230 240 TDRQLEDFQA IVALFPDVRA SLANSAGALG DPSLHFDLVR PGIAVYGARP RADVAPLQPV 250 260 270 280 290 300 VRLDLRIVQI RRVHEGETIG YGAAHTAKRE SRVAILSAGY ADGIPRLASA SDLRPGAEAV 310 320 330 340 350 360 VGGHRCPLIG RISMDLLAVD ITDVDEDAVA AGDFATLLGD GLALEDLARH SATIDYEILT 370 SLGRRYHRRW VQGA

References

[1]

"Complete sequence of Starkeya novella DSM 506." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U., Woyke T. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002026 Genomic DNA. Translation: ADH88397.1.
RefSeq	YP_003693016.1. NC_014217.1.
3D structure databases
ProteinModelPortal	D7A723.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADH88397; ADH88397; Snov_1077.
GeneID	9332138.
KEGG	sno:Snov_1077.
PATRIC	38254699. VBIStaNov45716_1080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031445.
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7A723_STAND

Accession

Primary (citable) accession number: D7A723

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)