D7A4I9 (D7A4I9_STAND) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase HAMAP-Rule MF_00484
EC=2.4.1.21 HAMAP-Rule MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase HAMAP-Rule MF_00484

Gene names

Name:	glgA HAMAP-Rule MF_00484
Ordered Locus Names:	Snov_2557 EMBL ADH89852.1

Organism

Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) [Complete proteome] [HAMAP] EMBL ADH89852.1

Taxonomic identifier

639283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Starkeya › Starkeya novella

Protein attributes

Sequence length	485 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484 SAAS SAAS013534
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484 SAAS SAAS013534
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP-Rule MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP-Rule MF_00484 SAAS SAAS013534
Molecular function	Glycosyltransferase HAMAP-Rule MF_00484 SAAS SAAS013534 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular_function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	18	1	ADP-glucose By similarity HAMAP-Rule MF_00484

Sequences

	Sequence		Length	Mass (Da)
	D7A4I9 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 09983B0819AACBD3	FASTA	485	51,002
	10 20 30 40 50 60 MSSLKILSVV SEVFPLVKTG GLADVAGALP AALAPHDIET RTLLPGYPAV LVALGEGETV 70 80 90 100 110 120 HRFDHLFGGP ARLLAGTAGG LDLFVIDAPH LYDRPGGPYV GPNGVDWGDN AQRFAALGAV 130 140 150 160 170 180 ASGLGLGLLP GFVPDIVHAH DWQAALAPAY LHYSGGRRPG TVMTIHNIAF QGQFPAYMFG 190 200 210 220 230 240 MLGLPPHAFA VDGVEYYGMV GYLKAGLQLA DRITTVSPGY AGEIRLPEGG MGLDGLLSAR 250 260 270 280 290 300 SDVVSGILNG LDEAAWNPAT DTLIPSPFDE KKLKARAANK VALKQAFGLD PDPDALLFGV 310 320 330 340 350 360 VSRLSWQKGL DLLADSLHTL TGLGAQLVLL GSGDADLAGR FSWAAQTNPG RIGVELGYDE 370 380 390 400 410 420 KAAHLIQAGS DVLIVPSRFE PCGLTQLSAL RYGALPLVSR VGGLADTVID VNEMARTTGV 430 440 450 460 470 480 GTGVQFSPVT APALQLALKR IAGLWQDKVL WKKLQRNAMT TDVSWERAAK QYAALFRQLA AERAA

References

[1]

"Complete sequence of Starkeya novella DSM 506." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U., Woyke T. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002026 Genomic DNA. Translation: ADH89852.1.
RefSeq	YP_003694471.1. NC_014217.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADH89852; ADH89852; Snov_2557.
GeneID	9333639.
KEGG	sno:Snov_2557.
PATRIC	38257705. VBIStaNov45716_2562.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000294941.
KO	K00703.
Enzyme and pathway databases
UniPathway	UPA00164.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth.
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D7A4I9_STAND

Accession

Primary (citable) accession number: D7A4I9

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)