D7A3K9 (D7A3K9_STAND) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP-Rule MF_00083
Short name=PTH HAMAP-Rule MF_00083
EC=3.1.1.29 HAMAP-Rule MF_00083

Gene names

Name:	pth HAMAP-Rule MF_00083
Ordered Locus Names:	Snov_2473 EMBL ADH89768.1

Organism

Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) [Complete proteome] [HAMAP] EMBL ADH89768.1

Taxonomic identifier

639283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Starkeya › Starkeya novella

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP-Rule MF_00083
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP-Rule MF_00083 RuleBase RU000673
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00083
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00083.
Sequence similarities	Belongs to the PTH family. HAMAP-Rule MF_00083 RuleBase RU004320

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP-Rule MF_00083
Molecular function	Hydrolase HAMAP-Rule MF_00083 RuleBase RU000673 EMBL ADH89768.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7A3K9 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 8F9E27036DAF60A7	FASTA	203	22,207
	10 20 30 40 50 60 MLLFVGLGNP GSKYAGNRHN IGFMAVDAIA RRQRFSPWRR RFQGAACEGE IDGVKVLCLL 70 80 90 100 110 120 PETYMNESGR AVAEAQRFYK IELKDILVFH DELDLPPAKV RVKIGGGNAG HNGLRSITAH 130 140 150 160 170 180 CGNDYPRIRL GIGHPGDKAL VHNYVLSDFA KAERGWVEAV CDGCADFAGL LATQRLDEFQ 190 200 NRMHLFLDAQ GFGTPAKAGA KPG

References

[1]

"Complete sequence of Starkeya novella DSM 506." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U., Woyke T. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002026 Genomic DNA. Translation: ADH89768.1.
RefSeq	YP_003694387.1. NC_014217.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADH89768; ADH89768; Snov_2473.
GeneID	9333554.
KEGG	sno:Snov_2473.
PATRIC	38257533. VBIStaNov45716_2477.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000004796.
KO	K01056.
Family and domain databases
Gene3D	3.40.50.1470. 1 hit.
HAMAP	MF_00083. Pept_tRNA_hydro_bact.
InterPro	IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view]
PANTHER	PTHR17224. PTHR17224. 1 hit.
Pfam	PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view]
SUPFAM	SSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMs	TIGR00447. pth. 1 hit.
PROSITE	PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7A3K9_STAND

Accession

Primary (citable) accession number: D7A3K9

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)