Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ornithine cyclodeaminase

Gene

Snov_3930

Organism
Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ornithine cyclodeaminase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSNOV639283:GCS4-3979-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ornithine cyclodeaminaseImported (EC:4.3.1.12Imported)
Gene namesi
Ordered Locus Names:Snov_3930Imported
OrganismiStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)Imported
Taxonomic identifieri639283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeStarkeya
ProteomesiUP000006633 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD6ZZK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000137263.
KOiK01750.
OMAiFPGNGAR.

Family and domain databases

Gene3Di3.30.1780.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003462. ODC_Mu_crystall.
IPR023401. ODC_N.
[Graphical view]
PfamiPF02423. OCD_Mu_crystall. 1 hit.
[Graphical view]
PIRSFiPIRSF001439. CryM. 1 hit.

Sequencei

Sequence statusi: Complete.

D6ZZK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELRFVSAG EIAGLLTFPA LIDALEAAFR RRITVPVRHH HGMPRPDGEA
60 70 80 90 100
TLLLMPAWTS EGTEDDVLGT KLVTVFPGNG ARGLDSVSGL YILNSGATGE
110 120 130 140 150
PLAVMDGRSL TVWRTAAASA LAARYLARAD ASRLAVIGAG ALAPYLARAH
160 170 180 190 200
ASVRPIRSIA IWNRTLAKAE AMAEALRAEG FDARAEADRG AAIAGADIVS
210 220 230 240 250
SATLSPQPLV EGLYLNPGQH VDLVGGFTPT MREADDEAIR RARVYVDTRA
260 270 280 290 300
GAGKEAGDIV VPLSTGVLAP DAIHGDLFEL TAGTAKGRGS DQEITLFKSV
310
GTAIEDLAAA ELVWKALKK
Length:319
Mass (Da):33,395
Last modified:August 10, 2010 - v1
Checksum:i66E9785583CBA959
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002026 Genomic DNA. Translation: ADH91200.1.
RefSeqiWP_013168701.1. NC_014217.1.
YP_003695819.1. NC_014217.1.

Genome annotation databases

EnsemblBacteriaiADH91200; ADH91200; Snov_3930.
KEGGisno:Snov_3930.
PATRICi38260501. VBIStaNov45716_3945.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002026 Genomic DNA. Translation: ADH91200.1.
RefSeqiWP_013168701.1. NC_014217.1.
YP_003695819.1. NC_014217.1.

3D structure databases

ProteinModelPortaliD6ZZK5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADH91200; ADH91200; Snov_3930.
KEGGisno:Snov_3930.
PATRICi38260501. VBIStaNov45716_3945.

Phylogenomic databases

HOGENOMiHOG000137263.
KOiK01750.
OMAiFPGNGAR.

Enzyme and pathway databases

BioCyciSNOV639283:GCS4-3979-MONOMER.

Family and domain databases

Gene3Di3.30.1780.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003462. ODC_Mu_crystall.
IPR023401. ODC_N.
[Graphical view]
PfamiPF02423. OCD_Mu_crystall. 1 hit.
[Graphical view]
PIRSFiPIRSF001439. CryM. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113Imported.

Entry informationi

Entry nameiD6ZZK5_STAND
AccessioniPrimary (citable) accession number: D6ZZK5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: April 1, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.