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D6ZY97 (D6ZY97_BIFLJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:BLJ_0417
OrganismBifidobacterium longum subsp. longum (strain JDM301) [Complete proteome] [HAMAP] EMBL ADG99893.1
Taxonomic identifier759350 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium ›

Protein attributes

Sequence length710 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Ontologies

Keywords
   Molecular functionGlycosidase PIRNR PIRNR001084
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processgalactose metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1611Proton donor By similarity PIRSR PIRSR001084-1
Active site3201Nucleophile By similarity PIRSR PIRSR001084-1
Binding site1221Substrate By similarity PIRSR PIRSR001084-2
Binding site1601Substrate By similarity PIRSR PIRSR001084-2
Binding site3281Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
D6ZY97 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: DCD7578DB5849763

FASTA71078,964
        10         20         30         40         50         60 
MTTHRAFRWP SLLTESGRGI AFGGDYNPDQ WPEETLDEDI RLMGEAGVNV VSLAIFSWDK 

        70         80         90        100        110        120 
IEPVEGAFTF EWLDHVIDRL GRAGIAVDLA SATAAAPLWL YESHPEVLPV DRYGHTVNAG 

       130        140        150        160        170        180 
SRQSWQPTSP VFKEYALRLC RKLAEHYKDN PYVTAWHMGN EYGWNNRYDY SDNALAAFRT 

       190        200        210        220        230        240 
WCEAKYGTID ALNEAWGTAF WSQHVNSFDE VLLPRHMGGD AMVNPSQQLD YERFGNDMLL 

       250        260        270        280        290        300 
DFYKAERDAI EQICPDKPFT TNFMVSTDQC VMNYAKWADE VDFVSNDHYF HEGESHLDEL 

       310        320        330        340        350        360 
ACSDALMDSL ALGKPWYVME HSTSAVQWKP LNTRKRAGEL MRDSLAHVAM GADAICFFQW 

       370        380        390        400        410        420 
RQSKSGAEAF HSAMLPHAGA DSKVFRGVCE LGKALKTLSD AGLQGTELER AGTAILFSAE 

       430        440        450        460        470        480 
SEWATRSETL PSMKLNHWHD VRDWYRGFLD AGLRADVVPL AYDWTGYKTI VLPTVLSLSD 

       490        500        510        520        530        540 
EDVLRIADFA KAGGTVIVGY AAGLIDEHFH IGLGGYPGAG NGLLRDMLGI RSEEFNILGE 

       550        560        570        580        590        600 
EAEGEPSEIS LSNGLTTRLW QNDVTSVAAD TTVLASYAGE SAADWELERT PAITSRPYGN 

       610        620        630        640        650        660 
GTAIYVGCDL NRHDIAQLLK ALGSRWQELS AQPTESGQTP TYPTTDPRIL HTIRRSADGS 

       670        680        690        700        710 
TRFDFYLNRS NQPVAINGVE GDPIIAHRCE TDAVGYTLNR NAILIAKTSC

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References

[1]"Complete genome sequence of Bifidobacterium longum JDM301."
Wei Y.X., Zhang Z.Y., Liu C., Zhu Y.Z., Zhu Y.Q., Zheng H., Zhao G.P., Wang S., Guo X.K.
J. Bacteriol. 192:4076-4077(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDM301 EMBL ADG99893.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002010 Genomic DNA. Translation: ADG99893.1.
RefSeqYP_003660724.1. NC_014169.1.

3D structure databases

ProteinModelPortalD6ZY97.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG99893; ADG99893; BLJ_0417.
GeneID9189083.
KEGGbll:BLJ_0417.
PATRIC38138784. VBIBifLon164510_0414.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000117811.
KOK12308.
OMAFDYEAWW.

Enzyme and pathway databases

BioCycBLON759350:GHJA-415-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD6ZY97_BIFLJ
AccessionPrimary (citable) accession number: D6ZY97
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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