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D6ZWV1 (D6ZWV1_BIFLJ) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length788 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D6ZWV1 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 077588DFA43ADE5D

FASTA78886,490
        10         20         30         40         50         60 
MGFSASHRAA ADTFNHPFDE DNLDVHNGHQ ELNRFNTEGA TSPHTGTAAP DGATPNHPNA 

        70         80         90        100        110        120 
SPPHAGHNAE TGRRPHHRHR KGVRIMTDTM AHTQPASPAS PAPTITAPGG RFVFGGDWNP 

       130        140        150        160        170        180 
EQWDESTWVD DIAKLERAGI NEATINVFSW ALIQPDESRY DFAMLDRIVD LLVAHNFGFV 

       190        200        210        220        230        240 
LATSTGALPA WIAQRYPDAT RTDYEGRRHR FGVRHNACPN SPNFLRLAGA LAGKLAERYG 

       250        260        270        280        290        300 
ANDHLIAWHI SNELGGRCYC DNCAAAFRVW LERKYGSIEA LNRAWNANFW SHTYADFAQI 

       310        320        330        340        350        360 
LPPNAISDGL DGERATLSAC SIDYKRFQSD SLLGTYVTER DAIRAFDAMH PITTNLMDTY 

       370        380        390        400        410        420 
EGADYFRWGR EMDVISWDDY PFPHTTPSDN AFKHDLMRGV GDGRPFMLME STPNQMNWQE 

       430        440        450        460        470        480 
CNVLRAPGRM RAESYQAVAH GADTVQYFQL KQSRGGFEKY HGAVISHGGR EDERVYGEVR 

       490        500        510        520        530        540 
ALGGELAAHG ARFVGGLTEA PVALMFDWDS YWSTENISLL PKGFDYPDQV RRWYAPFHHR 

       550        560        570        580        590        600 
NIAVDVVPED IDAGRLAGYR VLVAPALMMA KPGVRELVEG FVRAGGTFLA TVMAGMHDEH 

       610        620        630        640        650        660 
DNVILGGYPG AFREVCGMRM EEMDMIPDGR DVRVVFGSGE GEDADTDGSR VSLVAGLIKL 

       670        680        690        700        710        720 
DGGARPLAAY AGDVFYRGTP AVTVNDFGAG TAYFAGAVLD EAGMDAVVGD VVRRACVTGI 

       730        740        750        760        770        780 
VSPEPVEVVT RRYPSRGESL TFVINHADTA TAWQDTPFAG CESVLDGTVL GRDLVLEPYG 


VTVVRTAA 

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References

[1]"Complete genome sequence of Bifidobacterium longum JDM301."
Wei Y.X., Zhang Z.Y., Liu C., Zhu Y.Z., Zhu Y.Q., Zheng H., Zhao G.P., Wang S., Guo X.K.
J. Bacteriol. 192:4076-4077(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDM301 EMBL ADH01357.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002010 Genomic DNA. Translation: ADH01357.1.
RefSeqYP_003662187.1. NC_014169.1.

3D structure databases

ProteinModelPortalD6ZWV1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADH01357; ADH01357; BLJ_1934.
GeneID9190594.
KEGGbll:BLJ_1934.
PATRIC38141862. VBIBifLon164510_1910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000117811.
KOK12308.
OMASWDNYPP.

Enzyme and pathway databases

BioCycBLON759350:GHJA-1926-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProIPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD6ZWV1_BIFLJ
AccessionPrimary (citable) accession number: D6ZWV1
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)