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D6ZS04

- D6ZS04_STRP0

UniProt

D6ZS04 - D6ZS04_STRP0

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Protein
Submitted name: Cytoplasmic alpha-amylase
Gene
HMPREF0837_11165
Organism
Streptococcus pneumoniae serotype A19 (strain TCH8431)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSPNE525381:GH2H-1197-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:HMPREF0837_11165Imported
OrganismiStreptococcus pneumoniae serotype A19 (strain TCH8431)Imported
Taxonomic identifieri525381 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000009083: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD6ZS04.
SMRiD6ZS04. Positions 2-480.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiRATKYGD.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D6ZS04-1 [UniParc]FASTAAdd to Basket

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MQNQTLMQYF EWYLPHDGQH WTRLAENAPH LAHLGISHVW MPPAFKATNE    50
KDVGYGVYDL FDLGEFNQKG TVRTKYGFKE DYLQAIQALK AQGIQPMADV 100
VLNHKAAADH REAFQVIEVD PVDRTVELGE PFTINGWTSF TFDGRQDTYN 150
GFHWHWYHFT GTDYDAKRSK SGIYLIQGDN KGWANEELVD NENGNYDYLM 200
YADLDFKHPE VIQNIYDWAD WFMETTGVAG FRLDAVKHID SFFMRNFIRD 250
MKEKYGDDFY VFGEFWNPDK EANLDYLEKT EEHFDLVDVR LHQNLFEASQ 300
AGANYDLRGI FTDSLVELKP DKAVTFVDNH DTQRGQALES TVEEWFKPAA 350
YALILLRQDG LPCVFYGDYY GISGQYAQED FKEILDRLLA IRKDLAYGEQ 400
NDYFDHANCI GWVRSGAENQ SPIAVLISND QENSKSMFVG QEWTNQTFVD 450
LLGNHQGQVT IDEEGYGQFP VSARSVSVWA VNTI 484
Length:484
Mass (Da):55,918
Last modified:August 10, 2010 - v1
Checksum:i4E90A450A90EFB8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001993 Genomic DNA. Translation: ADI69393.1.
RefSeqiYP_003724607.1. NC_014251.1.

Genome annotation databases

EnsemblBacteriaiADI69393; ADI69393; HMPREF0837_11165.
GeneIDi9344421.
KEGGisnc:HMPREF0837_11165.
PATRICi38264036. VBIStrPne36006_1161.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001993 Genomic DNA. Translation: ADI69393.1 .
RefSeqi YP_003724607.1. NC_014251.1.

3D structure databases

ProteinModelPortali D6ZS04.
SMRi D6ZS04. Positions 2-480.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI69393 ; ADI69393 ; HMPREF0837_11165 .
GeneIDi 9344421.
KEGGi snc:HMPREF0837_11165.
PATRICi 38264036. VBIStrPne36006_1161.

Phylogenomic databases

HOGENOMi HOG000094847.
KOi K01176.
OMAi RATKYGD.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci SPNE525381:GH2H-1197-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A catalog of reference genomes from the human microbiome."
    Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T., Feldgarden M., Gevers D., Haas B.J., Madupu R., Ward D.V., Birren B.W., Gibbs R.A., Methe B.
    , Petrosino J.F., Strausberg R.L., Sutton G.G., White O.R., Wilson R.K., Durkin S., Giglio M.G., Gujja S., Howarth C., Kodira C.D., Kyrpides N., Mehta T., Muzny D.M., Pearson M., Pepin K., Pati A., Qin X., Yandava C., Zeng Q., Zhang L., Berlin A.M., Chen L., Hepburn T.A., Johnson J., McCorrison J., Miller J., Minx P., Nusbaum C., Russ C., Sykes S.M., Tomlinson C.M., Young S., Warren W.C., Badger J., Crabtree J., Markowitz V.M., Orvis J., Cree A., Ferriera S., Fulton L.L., Fulton R.S., Gillis M., Hemphill L.D., Joshi V., Kovar C., Torralba M., Wetterstrand K.A., Abouellleil A., Wollam A.M., Buhay C.J., Ding Y., Dugan S., FitzGerald M.G., Holder M., Hostetler J., Clifton S.W., Allen-Vercoe E., Earl A.M., Farmer C.N., Liolios K., Surette M.G., Xu Q., Pohl C., Wilczek-Boney K., Zhu D.
    Science 328:994-999(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TCH8431.

Entry informationi

Entry nameiD6ZS04_STRP0
AccessioniPrimary (citable) accession number: D6ZS04
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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