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Protein
Submitted name:

ABC transporter, substrate-binding protein, family 3

Gene

HMPREF0837_11153

Organism
Streptococcus pneumoniae serotype A19 (strain TCH8431)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSPNE525381:GH2H-1185-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter, substrate-binding protein, family 3Imported
Gene namesi
Ordered Locus Names:HMPREF0837_11153Imported
OrganismiStreptococcus pneumoniae serotype A19 (strain TCH8431)Imported
Taxonomic identifieri525381 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000009083 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Sequence analysisAdd
BLAST
Chaini32 – 271240Sequence analysisPRO_5003092133Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4H5FX-ray1.90A/B/C/D30-271[»]
4H5GX-ray1.78A/B30-271[»]
ProteinModelPortaliD6ZRZ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 263223PBPbInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000031895.
KOiK02030.
OMAiCKFKSET.
OrthoDBiEOG6JQH58.

Family and domain databases

InterProiIPR001320. Iontro_rcpt.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTiSM00062. PBPb. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D6ZRZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSKKWIFVL CNFLASFFLV ACQSGSNGSQ SAVEAIKQKG KLVVATSPDY
60 70 80 90 100
APFEFQSLVD GKNQVVGADI DMAQAIADEL GVKLEILSMS FDNVLTSLQT
110 120 130 140 150
GKADLAVAGI SATDERKEVF DFSIPYYENK ISFLVRKADV EKYKDLTSLE
160 170 180 190 200
SANIAAQKGT VPESMVKEQL PKAQLTSLTN MGEAVNELQA GKIDAVHMDE
210 220 230 240 250
PVALSYAAKN AGLAVATVSL KMKDGDANAV ALRKNSDDLK EVVDKVIQKL
260 270
KDEGTYQSYL EKAASLTEVE E
Length:271
Mass (Da):29,305
Last modified:August 10, 2010 - v1
Checksum:i03A77EFC1C9C5AB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001993 Genomic DNA. Translation: ADI69381.1.
RefSeqiWP_000837353.1. NC_014251.1.

Genome annotation databases

EnsemblBacteriaiADI69381; ADI69381; HMPREF0837_11153.
KEGGisnc:HMPREF0837_11153.
PATRICi38264012. VBIStrPne36006_1149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001993 Genomic DNA. Translation: ADI69381.1.
RefSeqiWP_000837353.1. NC_014251.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4H5FX-ray1.90A/B/C/D30-271[»]
4H5GX-ray1.78A/B30-271[»]
ProteinModelPortaliD6ZRZ2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI69381; ADI69381; HMPREF0837_11153.
KEGGisnc:HMPREF0837_11153.
PATRICi38264012. VBIStrPne36006_1149.

Phylogenomic databases

HOGENOMiHOG000031895.
KOiK02030.
OMAiCKFKSET.
OrthoDBiEOG6JQH58.

Enzyme and pathway databases

BioCyciSPNE525381:GH2H-1185-MONOMER.

Family and domain databases

InterProiIPR001320. Iontro_rcpt.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTiSM00062. PBPb. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A catalog of reference genomes from the human microbiome."
    Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T., Feldgarden M., Gevers D., Haas B.J., Madupu R., Ward D.V., Birren B.W., Gibbs R.A., Methe B.
    , Petrosino J.F., Strausberg R.L., Sutton G.G., White O.R., Wilson R.K., Durkin S., Giglio M.G., Gujja S., Howarth C., Kodira C.D., Kyrpides N., Mehta T., Muzny D.M., Pearson M., Pepin K., Pati A., Qin X., Yandava C., Zeng Q., Zhang L., Berlin A.M., Chen L., Hepburn T.A., Johnson J., McCorrison J., Miller J., Minx P., Nusbaum C., Russ C., Sykes S.M., Tomlinson C.M., Young S., Warren W.C., Badger J., Crabtree J., Markowitz V.M., Orvis J., Cree A., Ferriera S., Fulton L.L., Fulton R.S., Gillis M., Hemphill L.D., Joshi V., Kovar C., Torralba M., Wetterstrand K.A., Abouellleil A., Wollam A.M., Buhay C.J., Ding Y., Dugan S., FitzGerald M.G., Holder M., Hostetler J., Clifton S.W., Allen-Vercoe E., Earl A.M., Farmer C.N., Liolios K., Surette M.G., Xu Q., Pohl C., Wilczek-Boney K., Zhu D.
    Science 328:994-999(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TCH8431Imported.
  2. "Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1."
    Center for Structural Genomics of Infectious Diseases (CSGID)
    Stogios P.J., Wawrzak Z., Kudritska M., Minasov G., Yim V., Savchenko A., Anderson W.F.
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 30-271.
  3. "Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 2."
    Center for Structural Genomics of Infectious Diseases (CSGID)
    Stogios P.J., Wawrzak Z., Kudritska M., Minasov G., Yim V., Savchenko A., Anderson W.F.
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS) OF 30-271.

Entry informationi

Entry nameiD6ZRZ2_STRP0
AccessioniPrimary (citable) accession number: D6ZRZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 11, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.