D6ZQY2 (D6ZQY2_STRP0) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-beta-N-acetylglucosaminidase D EMBL ADI69021.1
EC=3.2.1.96 EMBL ADI69021.1

Gene names

Name:	lytB
Ordered Locus Names:	HMPREF0837_10793

Organism

Streptococcus pneumoniae serotype A19 (strain TCH8431) [Complete proteome] [HAMAP] EMBL ADI69021.1

Taxonomic identifier

525381 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus › Streptococcus pneumoniae

Protein attributes

Sequence length	1622 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Cellular component	Cell wall RuleBase RU000373 Secreted
Molecular function	Glycosidase EMBL ADI69021.1 Hydrolase
PTM	Peptidoglycan-anchor RuleBase RU000373
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pathogenesis Inferred from electronic annotation. Source: InterPro
Cellular_component	cell wall Inferred from electronic annotation. Source: UniProtKB-KW cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6ZQY2 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: A0D5FA1EC2D44C1D	FASTA	1,622	179,196
	10 20 30 40 50 60 MIGAVLFAGP ALAEETAVPE NSGANTELVS GESEHSTNEA DKQNEGEHTR ENKLEKAEGV 70 80 90 100 110 120 ATASETAEAA SAAKPEEKAS EVVAETPSAE AKPKSDKETE AKPEATNQGD ESKPAAEANK 130 140 150 160 170 180 TEKEVQPDVP KNTEKTLKPK EIKFNSWEEL LKWEPGARED DAINRGSVVL ASRRTGHLVN 190 200 210 220 230 240 EKASKEAKVQ ALSNTNSKAK DHASVGGEEF KAYAFDYWQY LDSMVFWEGL VPTPDVIDAG 250 260 270 280 290 300 HRNGVPVYGT LFFNWSNSIA DQERFAEALK QDADGSFPIA RKLVDMAKYY GYDGYFINQE 310 320 330 340 350 360 TTGDLVKPLG EKMRQFMLYS KEYAAKVNHP IKYSWYDAMT YNYGRYHQDG LGEYNYQFMQ 370 380 390 400 410 420 PEGDKVPADN FFANFNWDKA KNDYTIATAN WIGRNPYDVF AGLELQQGGS YKTKVKWNDI 430 440 450 460 470 480 LDENGKLRLS LGLFAPDTIT SLGKTGEDYH KNEDIFFTGY QGDPTGQKPG DKDWYGIANL 490 500 510 520 530 540 VADRTPAVGN TFTTSFNTGH GKKWFVDGKV SKDSEWNYRS VSGVLPTWRW WQTSTGEKLR 550 560 570 580 590 600 AEYDFTDAYN GGNSLKFSGD VAGKTDQDVR LYSTKLEVTE KTKLRVAHKG GKGSKVYMAF 610 620 630 640 650 660 STTPDYKFDD ADAWKELTLS DNWTNEEFDL SSLAGKTIYA VKLFFEHEGA VKDYQFNLGQ 670 680 690 700 710 720 LTISDNHQEP QSPTSFSVVK QSLKNAQEAE AVVQFKGNKD ADFYEVYEKD GDSWKLLTGS 730 740 750 760 770 780 SSTTIYLPKV SRSASAQGTT QELKVVAVGK NGVRSEAATT TFDWGMTVKD TSLPKPLAEN 790 800 810 820 830 840 IVPGATVIDS TFPKTEGGEG IEGMLNGTIT SLSDKWSSAQ LSGSVDIRLT KPRTVVRWVM 850 860 870 880 890 900 DHAGAGGESV NDGLMNTKDF DLYYKDADGE WKLAKEVRGN KAHVTDITLD KPITAQDWRL 910 920 930 940 950 960 NVVTSDNGTP WKAIRIYNWK MYEKLDTESV NIPMAKAAAR SLGNNKVQVG FADVPAGATI 970 980 990 1000 1010 1020 TVYDNPNSQT PLATLKSEVG GDLASAPLDL TNQSGLLYYR TQLPGKEISN VLAVSVPKDD 1030 1040 1050 1060 1070 1080 RRIKSVSLET GPKKTSYAEG EDLDLRGGVL RVQYEGGTED ELIRLTHAGV SVSGFDTHHK 1090 1100 1110 1120 1130 1140 GEQNLTLQYL GQPVNANLSV TVTGQDEASP KTILGIEVSQ EPKKDYLVGD SLDLSEGRFA 1150 1160 1170 1180 1190 1200 VAYSNDTMEE HSFTDEGVEI SGYDAQKTGR QTLTLRYQGH EVNFDVLVSP KAALNDEYLK 1210 1220 1230 1240 1250 1260 QKLAEVEAAK NKVVYNFASP EVKEAFLKAI EAAEQVLKDH ETSTQDQVND RLNKLTEAHK 1270 1280 1290 1300 1310 1320 ALNGQEKFKE EKTELDRLTG EVQELLAAKP NHPSGSALAP LLEKNKALVE KVDLSPEELA 1330 1340 1350 1360 1370 1380 TAKQSLKDLV ALLKEDKPAV FSDSKTGVEV HFSNKEKTVI KGLKVERVQA SAEEKKYFAG 1390 1400 1410 1420 1430 1440 EDAHVFEIEG LDEKGQDVDL SYASIVKIPI EKDKKVKKVF FLPEGKEAVE LAFEQTDSHV 1450 1460 1470 1480 1490 1500 IFTAPHFTHY AFVYESAEKP QPAKPAPQNK VLPKPTYQPA SDQQKAPKLE VQEEKVAFHR 1510 1520 1530 1540 1550 1560 QEHENTEMLV GEQRVIIQGR DGLLRHVFEV DENGQRRLRS TEVIQEAIPE IVEIGTKVKT 1570 1580 1590 1600 1610 1620 VPAVVATQEK PAQNTAVKSE EASKQLPNTG TADANEALIA GLASLGLASL ALTLRRKRED KD

References

[1]

"A catalog of reference genomes from the human microbiome." Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T., Feldgarden M., Gevers D., Haas B.J., Madupu R., Ward D.V., Birren B.W., Gibbs R.A., Methe B. , Petrosino J.F., Strausberg R.L., Sutton G.G., White O.R., Wilson R.K., Durkin S., Giglio M.G., Gujja S., Howarth C., Kodira C.D., Kyrpides N., Mehta T., Muzny D.M., Pearson M., Pepin K., Pati A., Qin X., Yandava C., Zeng Q., Zhang L., Berlin A.M., Chen L., Hepburn T.A., Johnson J., McCorrison J., Miller J., Minx P., Nusbaum C., Russ C., Sykes S.M., Tomlinson C.M., Young S., Warren W.C., Badger J., Crabtree J., Markowitz V.M., Orvis J., Cree A., Ferriera S., Fulton L.L., Fulton R.S., Gillis M., Hemphill L.D., Joshi V., Kovar C., Torralba M., Wetterstrand K.A., Abouellleil A., Wollam A.M., Buhay C.J., Ding Y., Dugan S., FitzGerald M.G., Holder M., Hostetler J., Clifton S.W., Allen-Vercoe E., Earl A.M., Farmer C.N., Liolios K., Surette M.G., Xu Q., Pohl C., Wilczek-Boney K., Zhu D. Science 328:994-999(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TCH8431.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001993 Genomic DNA. Translation: ADI69021.1.
RefSeq	YP_003724235.1. NC_014251.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI69021; ADI69021; HMPREF0837_10793.
GeneID	9344048.
KEGG	snc:HMPREF0837_10793.
PATRIC	38263286. VBIStrPne36006_0786.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000267693.
KO	K01227.
OMA	ARENKLE.
Family and domain databases
InterPro	IPR011080. Big_3. IPR011490. Extracell_matric-bd_Ebh. IPR011098. G5_dom. IPR005201. Glyco_hydro_85. IPR019948. Gram-positive_anchor. IPR009063. Ig/albumin-bd. IPR019931. LPXTG-motif_cell_wall_anchor. [Graphical view]
Pfam	PF07523. Big_3. 2 hits. PF07554. FIVAR. 1 hit. PF07501. G5. 1 hit. PF03644. Glyco_hydro_85. 1 hit. PF00746. Gram_pos_anchor. 1 hit. [Graphical view]
SUPFAM	SSF46997. Bac_Ig/alb_bind. 1 hit.
TIGRFAMs	TIGR01167. LPXTG_anchor. 1 hit.
PROSITE	PS51109. G5. 1 hit. PS50847. GRAM_POS_ANCHORING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D6ZQY2_STRP0

Accession

Primary (citable) accession number: D6ZQY2

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)