D6ZQA9 (D6ZQA9_STRP0) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 27.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Leucine--tRNA ligase HAMAP-Rule MF_00049 EC=6.1.1.4 HAMAP-Rule MF_00049 Alternative name(s): Leucyl-tRNA synthetase HAMAP-Rule MF_00049 | ||||
| Gene names |
| ||||
| Organism | Streptococcus pneumoniae serotype A19 (strain TCH8431) [Complete proteome] [HAMAP] EMBL ADI68798.1 | ||||
| Taxonomic identifier | 525381 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus › ![]() |
Protein attributes
| Sequence length | 833 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu). HAMAP-Rule MF_00049 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_00049. |
| Sequence similarities | Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00049 RuleBase RU003489 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Protein biosynthesis HAMAP-Rule MF_00049 RuleBase RU003489 |
| Cellular component | Cytoplasm HAMAP-Rule MF_00049 |
| Ligand | ATP-binding HAMAP-Rule MF_00049 RuleBase RU003489 Nucleotide-binding |
| Molecular function | Aminoacyl-tRNA synthetase HAMAP-Rule MF_00049 RuleBase RU003489 Ligase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | leucyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP regulation of translational fidelityInferred from electronic annotation. Source: GOC |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP aminoacyl-tRNA editing activityInferred from electronic annotation. Source: InterPro leucine-tRNA ligase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Motif | 41 – 52 | 12 | "HIGH" region By similarity HAMAP-Rule MF_00049 | ||||||
| Motif | 610 – 614 | 5 | "KMSKS" region By similarity HAMAP-Rule MF_00049 | ||||||
Sites | |||||||||
| Binding site | 613 | 1 | ATP By similarity HAMAP-Rule MF_00049 | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "A catalog of reference genomes from the human microbiome." Nelson K.E., Weinstock G.M., Highlander S.K., Worley K.C., Creasy H.H., Wortman J.R., Rusch D.B., Mitreva M., Sodergren E., Chinwalla A.T., Feldgarden M., Gevers D., Haas B.J., Madupu R., Ward D.V., Birren B.W., Gibbs R.A., Methe B. Zhu D.Science 328:994-999(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TCH8431. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001993 Genomic DNA. Translation: ADI68798.1. |
| RefSeq | YP_003724012.1. NC_014251.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADI68798; ADI68798; HMPREF0837_10570. |
| GeneID | 9343824. |
| KEGG | snc:HMPREF0837_10570. |
| PATRIC | 38262831. VBIStrPne36006_0559. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000200748. |
| KO | K01869. |
| OMA | WIFLQIF. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 3 hits. 3.90.740.10. 1 hit. |
| HAMAP | MF_00049_B. Leu_tRNA_synth_B. |
| InterPro | IPR001412. aa-tRNA-synth_I_CS. IPR002300. aa-tRNA-synth_Ia. IPR002302. Leu-tRNA-ligase_bac/mito. IPR025709. Leu_tRNA-synth_edit. IPR015413. Methionyl/Leucyl_tRNA_Synth. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. IPR013155. V/L/I-tRNA-synth_anticodon-bd. IPR009008. Val/Leu/Ile-tRNA-synth_edit. [Graphical view] |
| PANTHER | PTHR11946:SF7. PTHR11946:SF7. 1 hit. |
| Pfam | PF08264. Anticodon_1. 1 hit. PF00133. tRNA-synt_1. 2 hits. PF13603. tRNA-synt_1_2. 1 hit. PF09334. tRNA-synt_1g. 1 hit. [Graphical view] |
| PRINTS | PR00985. TRNASYNTHLEU. |
| SUPFAM | SSF47323. tRNAsyn_1a_bind. 1 hit. SSF50677. ValRS_IleRS_edit. 1 hit. |
| TIGRFAMs | TIGR00396. leuS_bact. 1 hit. |
| PROSITE | PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D6ZQA9_STRP0 | ||||||||
| Accession | Primary (citable) accession number: D6ZQA9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
