D6ZJD8 (D6ZJD8_MOBCV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uracil-DNA glycosylase EMBL ADI66837.1
EC=3.2.2.- EMBL ADI66837.1

Gene names

Name:	ung EMBL ADI66837.1
Ordered Locus Names:	HMPREF0573_10518 EMBL ADI66837.1

Organism

Mobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125) (Falcivibrio vaginalis) [Complete proteome] [HAMAP] EMBL ADI66837.1

Taxonomic identifier

548479 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Actinomycineae › Actinomycetaceae › Mobiluncus/Falcivibrio group › Mobiluncus › Mobiluncus curtisii

Protein attributes

Sequence length	232 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine By similarity. RuleBase RU003780
Catalytic activity	Hydrolyzes single-stranded DNA or mismatched double-stranded DNA and polynucleotides, releasing free uracil. RuleBase RU003780 SAAS SAAS002043
Sequence similarities	Belongs to the uracil-DNA glycosylase family. RuleBase RU003780

Ontologies

Keywords
Biological process	DNA damage DNA repair SAAS SAAS002043 RuleBase RU003780
Molecular function	Glycosidase RuleBase RU003780 SAAS SAAS002043 EMBL ADI66837.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	uracil DNA N-glycosylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6ZJD8 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: E3853EBA2A9A9AE1	FASTA	232	25,485
	10 20 30 40 50 60 MQTGEERGGL ERIMSPDWAQ VMAPVEGQIH AMGDFLRAEL AAGRGYFPAG ENVFHAFQYP 70 80 90 100 110 120 LERVKVLIVG QDPYPTPGHA MGLSFSVMSG TEIPRSLVNI FKELHQDLGL PLPTSGDLRP 130 140 150 160 170 180 WAEQGVMLLN RALTVQPGKP ASHRGRGWEA ITEFAIRELA NHHAAQGLPL VAILWGADAR 190 200 210 220 230 RTKEFMPHVP CLESVHPSPL SASRGFFGSR PFSRANELLV AQSGQPVDWR LP

References

[1]

"Complete sequence of Mobiluncus curtisii ATCC 43063." Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R. , Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R., Gibbs R. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43063 / DSM 2711 / V125.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001992 Genomic DNA. Translation: ADI66837.1.
RefSeq	YP_003718331.1. NC_014246.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI66837; ADI66837; HMPREF0573_10518.
GeneID	9336169.
KEGG	mcu:HMPREF0573_10518.
PATRIC	38203082. VBIMobCur30313_0504.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000229528.
KO	K03648.
Enzyme and pathway databases
BioCyc	MCUR548479:GH17-539-MONOMER.
Family and domain databases
Gene3D	3.40.470.10. 1 hit.
HAMAP	MF_00148. UDG.
InterPro	IPR018085. Ura-DNA_Glyclase_AS. IPR002043. Ura_DNA_glycsylse. IPR005122. Uracil-DNA_glycosylase-like. [Graphical view]
PANTHER	PTHR11264. PTHR11264. 1 hit.
Pfam	PF03167. UDG. 1 hit. [Graphical view]
SMART	SM00986. UDG. 1 hit. [Graphical view]
SUPFAM	SSF52141. UDNA_glycsylseSF. 1 hit.
TIGRFAMs	TIGR00628. ung. 1 hit.
PROSITE	PS00130. U_DNA_GLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D6ZJD8_MOBCV

Accession

Primary (citable) accession number: D6ZJD8

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)