Skip Header

Contribute Send feedback
Read comments (?) or add your own

D6ZI57 (D6ZI57_MOBCV) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease PH HAMAP-Rule MF_00564
Short name=RNase PH HAMAP-Rule MF_00564
EC=2.7.7.56 HAMAP-Rule MF_00564
Alternative name(s):
tRNA nucleotidyltransferase HAMAP-Rule MF_00564
Gene names
Name:rph HAMAP-Rule MF_00564 EMBL ADI66406.1
Ordered Locus Names:HMPREF0573_10087 EMBL ADI66406.1
OrganismMobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125) (Falcivibrio vaginalis) [Complete proteome] [HAMAP] EMBL ADI66406.1
Taxonomic identifier548479 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Actinomycineae › Actinomycetaceae › Mobiluncus/Falcivibrio group › Mobiluncus ›

Protein attributes

Sequence length257 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. HAMAP-Rule MF_00564 SAAS SAAS002381

Catalytic activity

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP-Rule MF_00564 SAAS SAAS002381

Sequence similarities

Belongs to the RNase PH family. HAMAP-Rule MF_00564

Sequences

Sequence LengthMass (Da)Tools
D6ZI57 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 6FF49B6611440CA0

FASTA25727,397
        10         20         30         40         50         60 
MTERIERADG RRMDQLREVT LHMDWVSAPE GCVLVSCGNT RVLCSASLTE GVPRWRKDSG 

        70         80         90        100        110        120 
FGWVTAEYAM LPRATDTRNT RESVKGKISG RTSEISRLIG RALRAAVDYA ALGENTIAID 

       130        140        150        160        170        180 
CDVLQADGGT RTASITGAWI ALQRAIAVGR DSGFIPGNPT RDSVCAISVG IIDSIPRLDL 

       190        200        210        220        230        240 
PYEEDSRAET DMNVVMTGSG SLVEVQGTAE GAPFSRAELD ALLDLAQAGC RDLTRLQRAA 

       250 
VDSAPGAVLT LTDGVIA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001992 Genomic DNA. Translation: ADI66406.1.
RefSeqYP_003717900.1. NC_014246.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADI66406; ADI66406; HMPREF0573_10087.
GeneID9335724.
KEGGmcu:HMPREF0573_10087.
PATRIC38202214. VBIMobCur30313_0083.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229516.
KOK00989.

Enzyme and pathway databases

BioCycMCUR548479:GH17-94-MONOMER.

Family and domain databases

HAMAPMF_00564. RNase_PH.
InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMSSF55666. 3_ExoRNase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMsTIGR01966. RNasePH. 1 hit.
PROSITEPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD6ZI57_MOBCV
AccessionPrimary (citable) accession number: D6ZI57
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info