Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Superoxide dismutase copper/zinc binding protein

Gene

Srot_0824

Organism
Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSROT640132:GHEU-845-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc binding proteinImported
Gene namesi
Ordered Locus Names:Srot_0824Imported
OrganismiSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)Imported
Taxonomic identifieri640132 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeSegniliparaceaeSegniliparus
ProteomesiUP000002247 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD6ZE23.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiYNQTNGT.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

D6ZE23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHVDSKRKA SHGDSTGVVR AALAFAALAA LAGCTNSEQD SVVGGPGATP
60 70 80 90 100
KSGAAHPGHV GASAEPGASS AAKGNGGSEH ASAELKNAQG ADAGTVDFTQ
110 120 130 140 150
NGGKVVIKID VKGLTPGFHA VHIHAVGKCE PQSTAPGGQG APGAFLSAGG
160 170 180 190 200
HYQAPGHTGM PMSGDLTNLL VMKDGTGKLT LETDAFQLSQ LDSGAGTSII
210 220 230 240
VHDKASNFGN IPADRYKSAQ EGGPVPDETT MKTEDAGGRA VCGVIAPTA
Length:249
Mass (Da):24,540
Last modified:August 10, 2010 - v1
Checksum:i47E5B35B9942B270
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001958 Genomic DNA. Translation: ADG97303.1.
RefSeqiWP_013137759.1. NC_014168.1.
YP_003658134.1. NC_014168.1.

Genome annotation databases

EnsemblBacteriaiADG97303; ADG97303; Srot_0824.
KEGGisrt:Srot_0824.
PATRICi38247883. VBISegRot51051_0841.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001958 Genomic DNA. Translation: ADG97303.1.
RefSeqiWP_013137759.1. NC_014168.1.
YP_003658134.1. NC_014168.1.

3D structure databases

ProteinModelPortaliD6ZE23.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG97303; ADG97303; Srot_0824.
KEGGisrt:Srot_0824.
PATRICi38247883. VBISegRot51051_0841.

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiYNQTNGT.

Enzyme and pathway databases

BioCyciSROT640132:GHEU-845-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578Imported.

Entry informationi

Entry nameiD6ZE23_SEGRD
AccessioniPrimary (citable) accession number: D6ZE23
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: April 1, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.