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D6ZCB7 (D6ZCB7_SEGRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Riboflavin biosynthesis protein RibD PIRNR PIRNR006769
Gene names
Ordered Locus Names:Srot_2652
OrganismSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) [Complete proteome] [HAMAP]
Taxonomic identifier640132 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Segniliparaceae › Segniliparus ›

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate By similarity. PIRNR PIRNR006769

Cofactor

Binds 1 zinc ion By similarity. PIRNR PIRNR006769

Pathway

Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP. PIRNR PIRNR006769

Sequence similarities

In the C-terminal section; belongs to the HTP reductase family. PIRNR PIRNR006769

In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family. PIRNR PIRNR006769

Sequences

Sequence LengthMass (Da)Tools
D6ZCB7 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 45BBC10474C59638

FASTA34335,406
        10         20         30         40         50         60 
MPVRDLPVDE AFMREAIAVS RLARGRTSPN PPVGAVLVSP DGQIVGRGAT RPPGQEHAEV 

        70         80         90        100        110        120 
VALAQAGERA RGATAYVTLE PCNHVGRTGP CARALVDAGV AAVVCAVPDP NQRSGGGAKT 

       130        140        150        160        170        180 
LEAAGVGVRV GVLAHEARTG PLREWLHAQR TGRPHVTWKF AATLDGRSAA RDGSSQWITG 

       190        200        210        220        230        240 
PQIRKSVHAV RAELDAIIVG TGTALADDPW LTARLPDGSL APRQPTRVVV GMTELPRGAR 

       250        260        270        280        290        300 
VLDGSAPTVL AKTRDPAEAL AMLGDAVHVL LEGGPTLAAA FLRAGLVDLV QAHIAPVLLG 

       310        320        330        340 
AGPAALGDLG IATLADALRF TVEEVRQVGR DVLVQLAPGQ GYP

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001958 Genomic DNA. Translation: ADG99086.1.
RefSeqYP_003659917.1. NC_014168.1.

3D structure databases

ProteinModelPortalD6ZCB7.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG99086; ADG99086; Srot_2652.
GeneID9180720.
KEGGsrt:Srot_2652.
PATRIC38251640. VBISegRot51051_2698.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000257442.
KOK11752.
OMAPDYQTMA.

Family and domain databases

Gene3D3.40.430.10. 1 hit.
InterProIPR016192. APOBEC/CMP_deaminase_Zn-bd.
IPR002125. CMP_dCMP_Zn-bd.
IPR016193. Cytidine_deaminase-like.
IPR024072. DHFR-like_dom.
IPR004794. Eubact_RibD.
IPR002734. RibDG_C.
[Graphical view]
PfamPF00383. dCMP_cyt_deam_1. 1 hit.
PF01872. RibD_C. 1 hit.
[Graphical view]
PIRSFPIRSF006769. RibD. 1 hit.
SUPFAMSSF53927. Cytidine_deaminase-like. 1 hit.
SSF53597. SSF53597. 1 hit.
TIGRFAMsTIGR00326. eubact_ribD. 1 hit.
PROSITEPS00903. CYT_DCMP_DEAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD6ZCB7_SEGRD
AccessionPrimary (citable) accession number: D6ZCB7
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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