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D6ZB81

- D6ZB81_SEGRD

UniProt

D6ZB81 - D6ZB81_SEGRD

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Protein
Alanine racemase
Gene
Srot_0353
Organism
Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei35 – 351Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei138 – 1381Substrate By similarityUniRule annotation
Active sitei274 – 2741Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei322 – 3221Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSROT640132:GHEU-362-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Srot_0353Imported
OrganismiSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)Imported
Taxonomic identifieri640132 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeSegniliparaceaeSegniliparus
ProteomesiUP000002247: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei35 – 351N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD6ZB81.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000031444.
KOiK01775.
OMAiIYSHLAL.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D6ZB81-1 [UniParc]FASTAAdd to Basket

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MIPAVQATVD HHAIAHNVRL LAQASAPAQV IAVLKANAYG HGAVPVARTA    50
LAAGAAQIGV ATLAEAFELR QGGIEAPIIA WLHAFDPDEA VAVFAEAIAS 100
GIELGVSTSS QVRAVAEAAL RADQLAVVAV KVDTGLNRGG FARGEWRKAF 150
ADLANAEAAG AVQVRGVFSH LANADRPEYR TNAEQARSLR EAVSFARAAG 200
LAPELVHLAN SPAVLTRPKA LVNELPVFNA TRPGVAVYGL SPIMGRDFGL 250
IPAMTLTARV GLTKRIHAGD GVSYGHDFVA ASDTTLALLP IGYADGLQRA 300
LAGKFEVSIG GRRYPGVGRV CMDQVLVDLG PGEPKVREGD TAVLFGPGSD 350
GEQTADDWAR AAGTINYEIV TQLRGRVQLR HIHQREPVDQ LRHTHHA 397
Length:397
Mass (Da):41,666
Last modified:August 10, 2010 - v1
Checksum:i98853E8F192AE9DB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001958 Genomic DNA. Translation: ADG96840.1.
RefSeqiWP_013137296.1. NC_014168.1.
YP_003657671.1. NC_014168.1.

Genome annotation databases

EnsemblBacteriaiADG96840; ADG96840; Srot_0353.
GeneIDi9178387.
KEGGisrt:Srot_0353.
PATRICi38246887. VBISegRot51051_0354.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001958 Genomic DNA. Translation: ADG96840.1 .
RefSeqi WP_013137296.1. NC_014168.1.
YP_003657671.1. NC_014168.1.

3D structure databases

ProteinModelPortali D6ZB81.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG96840 ; ADG96840 ; Srot_0353 .
GeneIDi 9178387.
KEGGi srt:Srot_0353.
PATRICi 38246887. VBISegRot51051_0354.

Phylogenomic databases

HOGENOMi HOG000031444.
KOi K01775.
OMAi IYSHLAL.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SROT640132:GHEU-362-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578.

Entry informationi

Entry nameiD6ZB81_SEGRD
AccessioniPrimary (citable) accession number: D6ZB81
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: September 3, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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