D6ZB01 (D6ZB01_SEGRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ADG96760.1
EC=4.1.1.15 EMBL ADG96760.1

Gene names

Ordered Locus Names:

Srot_0273

Organism

Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) [Complete proteome] [HAMAP]

Taxonomic identifier

640132 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Segniliparaceae › Segniliparus › Segniliparus rotundus

Protein attributes

Sequence length	449 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ADG96760.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6ZB01 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 7E750A1895EFFEC9	FASTA	449	49,230
	10 20 30 40 50 60 MSTDPAYTSW LDLQFQPPAR LGDTSLDADG VARHIHDELM LDGSSRLNLA TFVSTWMEPQ 70 80 90 100 110 120 AQKLMVEAFD KNMIDKDEYP ATAAIETRCV SIVADLFHAP GLDPGDPGTA TGVSTIGSSE 130 140 150 160 170 180 AVMLGGLALK WRWRLARERA GASTARPNLV LGSNVQVVWE KFCRYFEVEP RYLPMAPGRY 190 200 210 220 230 240 TITAEQVREA VDENTIGVVA ILGTTFTGEF EPVEQIAQVL DELAASGGPD VKIHVDAASG 250 260 270 280 290 300 GFVAPFLHPE LRWDFRVPRV ASINVSGHKY GLTYPGVGFV VWRDREQLPE ELIFRVSYLG 310 320 330 340 350 360 GDMPTFTLNF SRPGNQVIGQ YYNFLRFGRE GYTRIMGALQ HIARWIADEL AALPGVRMIA 370 380 390 400 410 420 DGSAIPVVAF ALDEELGYDV YALSHALRAG GWQVPAYPMP EGAQGLSVLR IVVREGFSGE 430 440 LARALVQAVG TAMQELSQGG LKPRKQFMH

References

[1]

"Complete genome sequence of Segniliparus rotundus type strain (CDC 1076)." Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.-F., Jando M., Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K., Mikhailova N., Pati A. , Ivanova N., Mavromatis K., Chen A., Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.-J., Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 2:203-211(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001958 Genomic DNA. Translation: ADG96760.1.
RefSeq	YP_003657591.1. NC_014168.1.
3D structure databases
ProteinModelPortal	D6ZB01.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG96760; ADG96760; Srot_0273.
GeneID	9178306.
KEGG	srt:Srot_0273.
PATRIC	38246711. VBISegRot51051_0267.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
Enzyme and pathway databases
BioCyc	SROT640132:GHEU-281-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D6ZB01_SEGRD

Accession

Primary (citable) accession number: D6ZB01

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 29, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)