D6Y650 (D6Y650_THEBD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 21.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Superoxide dismutase [Cu-Zn] RuleBase RU000393 EC=1.15.1.1 RuleBase RU000393 | ||
| Gene names |
| ||
| Organism | Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) [Complete proteome] [HAMAP] EMBL ADG89466.1 | ||
| Taxonomic identifier | 469371 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Thermobispora › ![]() |
Protein attributes
| Sequence length | 204 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393 |
| Catalytic activity | 2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393 |
| Cofactor | Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393 |
| Sequence similarities | Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393 |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL ADG89466.1 |
| Ligand | Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393 |
| Molecular function | Oxidoreductase RuleBase RU000393 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | superoxide metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 21 | 21 | Potential EMBL ADG89466.1 | |||||
| Chain | 22 – 204 | 183 | Potential | PRO_5000602840 | ||||
Sequences
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References
| [1] | "The complete genome of Thermobispora bispora DSM 43833." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F. Eisen J.A.Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001874 Genomic DNA. Translation: ADG89466.1. |
| RefSeq | YP_003653359.1. NC_014165.1. |
3D structure databases | |
| ProteinModelPortal | D6Y650. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADG89466; ADG89466; Tbis_2767. |
| GeneID | 9169280. |
| KEGG | tbi:Tbis_2767. |
| PATRIC | 38288719. VBITheBis80272_2882. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000263448. |
| KO | K04565. |
Family and domain databases | |
| Gene3D | 2.60.40.200. 1 hit. |
| InterPro | IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view] |
| PANTHER | PTHR10003. PTHR10003. 1 hit. |
| Pfam | PF00080. Sod_Cu. 1 hit. [Graphical view] |
| SUPFAM | SSF49329. SOD_Cu_Zn. 1 hit. |
| PROSITE | PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D6Y650_THEBD | ||||||||
| Accession | Primary (citable) accession number: D6Y650 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
