D6Y4U9 (D6Y4U9_THEBD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 21.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase HAMAP-Rule MF_01039 Short name=BPG-dependent PGAM HAMAP-Rule MF_01039 Short name=PGAM HAMAP-Rule MF_01039 Short name=Phosphoglyceromutase HAMAP-Rule MF_01039 Short name=dPGM HAMAP-Rule MF_01039 EC=5.4.2.1 HAMAP-Rule MF_01039 | ||||
| Gene names |
| ||||
| Organism | Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) [Complete proteome] [HAMAP] EMBL ADG87224.1 | ||||
| Taxonomic identifier | 469371 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Thermobispora › ![]() |
Protein attributes
| Sequence length | 247 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate By similarity. RuleBase RU004512 HAMAP-Rule MF_01039 |
| Catalytic activity | 2-phospho-D-glycerate = 3-phospho-D-glycerate. RuleBase RU004512 HAMAP-Rule MF_01039 SAAS SAAS013078 |
| Pathway | Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 3/5. RuleBase RU004512 HAMAP-Rule MF_01039 |
| Sequence similarities | Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily. HAMAP-Rule MF_01039 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Glycolysis HAMAP-Rule MF_01039 SAAS SAAS013078 |
| Molecular function | Isomerase HAMAP-Rule MF_01039 SAAS SAAS013078 EMBL ADG87224.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | glycolysis Inferred from electronic annotation. Source: HAMAP |
| Molecular_function | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 9 | 1 | Tele-phosphohistidine intermediate By similarity HAMAP-Rule MF_01039 | ||||||
| Active site | 182 | 1 | By similarity HAMAP-Rule MF_01039 | ||||||
| Site | 60 | 1 | Interaction with carboxyl group of phosphoglycerates By similarity HAMAP-Rule MF_01039 | ||||||
Sequences
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References
| [1] | "The complete genome of Thermobispora bispora DSM 43833." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F. Eisen J.A.Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001874 Genomic DNA. Translation: ADG87224.1. |
| RefSeq | YP_003651117.1. NC_014165.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADG87224; ADG87224; Tbis_0496. |
| GeneID | 9166978. |
| KEGG | tbi:Tbis_0496. |
| PATRIC | 38283884. VBITheBis80272_0493. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000221682. |
| KO | K01834. |
Enzyme and pathway databases | |
| UniPathway | UPA00109; UER00186. |
Family and domain databases | |
| HAMAP | MF_01039. PGAM_GpmA. |
| InterPro | IPR013078. His_Pase_superF_clade-1. IPR001345. PG/BPGM_mutase_AS. IPR005952. Phosphogly_mut1. [Graphical view] |
| PANTHER | PTHR11931. PTHR11931. 1 hit. |
| Pfam | PF00300. His_Phos_1. 1 hit. [Graphical view] |
| SMART | SM00855. PGAM. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01258. pgm_1. 1 hit. |
| PROSITE | PS00175. PG_MUTASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D6Y4U9_THEBD | ||||||||
| Accession | Primary (citable) accession number: D6Y4U9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
