D6Y393 (D6Y393_THEBD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL ADG88968.1

Gene names

Ordered Locus Names:

Tbis_2258 EMBL ADG88968.1

Organism

Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) [Complete proteome] [HAMAP] EMBL ADG88968.1

Taxonomic identifier

469371 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Thermobispora › Thermobispora bispora

Protein attributes

Sequence length	332 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6Y393 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 393EF666BD852B71	FASTA	332	37,623
	10 20 30 40 50 60 MASPYIELEA GARVIRLTNP DKIYFPGVGA TKRDLVEYYL SVGDGVLRAM RDRPTYLKRH 70 80 90 100 110 120 PDGVSSEAIY QKRLPRHPEW IETVTVRFPS GRTAAALCPT EIAAIAWCVN LGTIDFHPWP 130 140 150 160 170 180 VRKTDLDHPD ELRIDVDPQP GTTFEDARTA AFAVRDLLAE LGMTGYPKTS GGRGLHISVR 190 200 210 220 230 240 IRPRWTFTEV RHAAIAFARE VERRMPELVT TAWWKEERGA KIFLDFNQNA RDRTIASAYS 250 260 270 280 290 300 VRARPDALVS APVTWDELAS CDPRDFDIRT MPRRFAERGD VHRAIDDEEF DIGVLLEWFA 310 320 330 ADGRGDLPYP PTHPKMPGEP KRVQPSRARD HG

References

[1]

"The complete genome of Thermobispora bispora DSM 43833." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F. , Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Schneider S., Klenk H.-P., Eisen J.A. Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001874 Genomic DNA. Translation: ADG88968.1.
RefSeq	YP_003652861.1. NC_014165.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG88968; ADG88968; Tbis_2258.
GeneID	9168760.
KEGG	tbi:Tbis_2258.
PATRIC	38287591. VBITheBis80272_2328.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000244654.
KO	K01971.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D6Y393_THEBD

Accession

Primary (citable) accession number: D6Y393

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)