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D6XSS1 (D6XSS1_BACIE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Malate dehydrogenase (Oxaloacetate-decarboxylating) EMBL ADH98857.1
EC=1.1.1.38 EMBL ADH98857.1
Gene names
Ordered Locus Names:Bsel_1345
OrganismBacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) [Complete proteome] [HAMAP] EMBL ADH98857.1
Taxonomic identifier439292 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Divalent metal cations. Prefers magnesium or manganese By similarity. PIRSR PIRSR000106-3

Sequence similarities

Belongs to the malic enzymes family. RuleBase RU003427

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site371Proton donor By similarity
Active site921Proton acceptor By similarity
Metal binding1341Divalent metal cation By similarity PIRSR PIRSR000106-3
Metal binding1351Divalent metal cation By similarity PIRSR PIRSR000106-3
Metal binding1601Divalent metal cation By similarity PIRSR PIRSR000106-3

Sequences

Sequence LengthMass (Da)Tools
D6XSS1 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: F1CF0AD7AD45E5E3

FASTA41244,097
        10         20         30         40         50         60 
MSTLREEALH MHRVHQGKLE TTPKVAVRNA EDLSLAYSPG VAEPCKEIFE DPQTVYEYTV 

        70         80         90        100        110        120 
KGNMVGVVSD GSAVLGLGNI GPEAAMPVME GKAVLFKSFA GVDAFPICLN TNDVDTIVNT 

       130        140        150        160        170        180 
VKLMEPTFGG INLEDISAPR CFEIEERLKR EMNIPVFHDD QHGTAIVTAA GLVNALKLSG 

       190        200        210        220        230        240 
KKMGEIKVVV NGAGAAGIAI IKLLMSMGCK SFILCDSKGA IFEGRPYGMN DLKDELAQKT 

       250        260        270        280        290        300 
NLEKKEGSLK DVIKDTDVFI GVSVEGAVDK EMVASMNQNP IIFAMANPVP EIMPEDAKAA 

       310        320        330        340        350        360 
GASVIGTGRS DFPNQVNNVL AFPGIFRGAL DVFATHINEE MKIAAVNAIA GLVGDNEVNT 

       370        380        390        400        410 
DYVIPNPFDK RVAPAVAKAV AIAAMETGVA RRKVDPDAVE KKTYDLTMID EE

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References

[1]"Complete sequence of Bacillus selenitireducens MLS10."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Stolz J.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700615 / DSM 15326 / MLS10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001791 Genomic DNA. Translation: ADH98857.1.
RefSeqYP_003699423.1. NC_014219.1.

3D structure databases

ProteinModelPortalD6XSS1.
SMRD6XSS1. Positions 2-385.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADH98857; ADH98857; Bsel_1345.
GeneID9263917.
KEGGbse:Bsel_1345.
PATRIC38121985. VBIBacSel78655_1438.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000132447.
KOK00027.

Enzyme and pathway databases

BioCycBSEL439292:GHLG-1407-MONOMER.

Family and domain databases

Gene3D3.40.50.10380. 1 hit.
3.40.50.720. 1 hit.
InterProIPR015884. Malic_enzyme_CS.
IPR012301. Malic_N.
IPR012302. Malic_NAD-bd.
IPR001891. Malic_OxRdtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF00390. malic. 1 hit.
PF03949. Malic_M. 1 hit.
[Graphical view]
PIRSFPIRSF000106. ME. 1 hit.
PRINTSPR00072. MALOXRDTASE.
SMARTSM00919. Malic_M. 1 hit.
[Graphical view]
PROSITEPS00331. MALIC_ENZYMES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD6XSS1_BACIE
AccessionPrimary (citable) accession number: D6XSS1
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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