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Protein

Succinate dehydrogenase iron-sulfur subunit

Gene

HPV225_0205

Organism
Helicobacter pylori (strain v225d)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • [2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation
  • [3Fe-4S] clusterUniRule annotationNote: Binds 1 [3Fe-4S] cluster.UniRule annotation
  • [4Fe-4S] clusterUniRule annotationNote: Binds 1 [4Fe-4S] cluster.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Ligand2Fe-2SUniRule annotation, 3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase iron-sulfur subunitUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Ordered Locus Names:HPV225_0205Imported
OrganismiHelicobacter pylori (strain v225d)Imported
Taxonomic identifieri637913 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000007088 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 982Fe-2S ferredoxin-typeInterPro annotationAdd BLAST82
Domaini145 – 1744Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30

Sequence similaritiesi

Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000160590
KOiK00245
OMAiESWIHTN

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di1.10.1060.10, 1 hit
3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR017896 4Fe4S_Fe-S-bd
IPR017900 4Fe4S_Fe_S_CS
IPR012675 Beta-grasp_dom_sf
IPR009051 Helical_ferredxn
IPR004489 Succ_DH/fum_Rdtase_Fe-S
IPR025192 Succ_DH/fum_Rdtase_N
PfamiView protein in Pfam
PF13085 Fer2_3, 1 hit
PF13183 Fer4_8, 1 hit
SUPFAMiSSF46548 SSF46548, 1 hit
SSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR00384 dhsB, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit
PS00198 4FE4S_FER_1, 1 hit
PS51379 4FE4S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

D6XNF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDNERTIVI RVLKFDPQSA VSKPHFKEYQ LKETPSMTLF IALNLIREHQ
60 70 80 90 100
DPDLSFDFVC RAGICGSCAM MVNGRPRLAC KTLTSSFESG VITLMPMPSF
110 120 130 140 150
TLIKDLSVNT GDWFGDMTKR VESWVHSKEE VDITKPEKRI EPDEAQEVFE
160 170 180 190 200
LDRCIECGCC IASCGTKLMR PNFIGAAGMN RAMRFMIDSH DERSDDDFYE
210 220 230 240
LVGDDDGVFG CMSLIACHDT CPKELPLQSS IATLRNRMLK VGKSR
Length:245
Mass (Da):27,597
Last modified:August 10, 2010 - v1
Checksum:iD3A10ADE47EDBAC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001582 Genomic DNA Translation: ADI34301.1
RefSeqiWP_001282399.1, NC_017355.1

Genome annotation databases

EnsemblBacteriaiADI34301; ADI34301; HPV225_0205
KEGGihpv:HPV225_0205
PATRICifig|637913.3.peg.205

Similar proteinsi

Entry informationi

Entry nameiD6XNF7_HELPV
AccessioniPrimary (citable) accession number: D6XNF7
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: December 20, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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