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D6WL52 (D6WL52_TRICA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL EFA03506.1
Gene names
ORF Names:TcasGA2_TC013507 EMBL EFA03506.1
OrganismTribolium castaneum (Red flour beetle) [Complete proteome]
Taxonomic identifier7070 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Coleoptera › Polyphaga › Cucujiformia › Tenebrionidae › Tenebrionidae incertae sedis › Tribolium

Protein attributes

Sequence length707 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2831 By similarity PIRSR PIRSR000459-1
Active site3461 By similarity PIRSR PIRSR000459-1
Active site3691 By similarity PIRSR PIRSR000459-1
Metal binding4091Calcium By similarity PIRSR PIRSR000459-2
Metal binding4111Calcium By similarity PIRSR PIRSR000459-2
Metal binding4661Calcium By similarity PIRSR PIRSR000459-2
Metal binding4711Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
D6WL52 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 7A937414913F0211

FASTA70780,037
        10         20         30         40         50         60 
MEPIEVQSTE FYPKDNAREN HTAEYDLVNN PDFPTPILRR GCNFFFAIRF NRDFDEINDV 

        70         80         90        100        110        120 
VRVRFGFGPK PNVIRGTRAI LPILARQKVL PKNTHMWSSC VTRIDGNIVM LQVHIPPNAQ 

       130        140        150        160        170        180 
VGIWKCSIQT NISGQRDKRY DHKVEDDIYI LFNPWCEDDG VYMPDEKEKQ EYILNENGKI 

       190        200        210        220        230        240 
WCGTFKKPVG RHWIFGQFDD IVLPAAVLLL DKSGLAPADR GSPVLVTRAI SAVINSVDDD 

       250        260        270        280        290        300 
GLLEGRWDGN YSDGTSPHAW TGSVAILDQY LRTGGTPMKY GQCWVFSAAT VSVCRALGIP 

       310        320        330        340        350        360 
CRSVTNYVSA HDTNCSLTVD KYFDLFGNKI ENGPEGDCND SCWNFHVWND VWMTRPDLPP 

       370        380        390        400        410        420 
GYGGWQIIDA TPQEQSDRIF RCGPASVEAV RKGLVGYLYD TPFVFSEVNA DIIHFQEDQN 

       430        440        450        460        470        480 
SDWGFSRLKI NQYHVGRKIV TKRSDLTDEK GDSDMWNITS FYKNLEGTEA ERLAVYNAVK 

       490        500        510        520        530        540 
GVPKAQHLYD FPSEVQEDVF FDLVDIDSIP FGENFEVRVE MENRSGETRT ISAVLSASSI 

       550        560        570        580        590        600 
FYTGVTASQV KRLQQTFTLD SNQKETLKIT ITPEEYLDKL VDHGLIKIYA IANVKETKQT 

       610        620        630        640        650        660 
WSEEDDFTLI KPEITVEIAD ACKVGEDCSV SLSFQNPLDL PLTDCIYTIE GLQKPKTVQF 

       670        680        690        700 
RDVQPKETVN ISDSFKAKRP GERRIVVNFN SRQMQGISGT SKVTVLL

« Hide

References

« Hide 'large scale' references
[1]"The genome of the model beetle and pest Tribolium castaneum."
Tribolium Genome Sequencing Consortium
Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D. expand/collapse author list , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Georgia GA2 EMBL EFA03506.1.
[2]"BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Georgia GA2 EMBL EFA03506.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000280 Genomic DNA. Translation: EFA03506.1.
RefSeqXP_972752.1. XM_967659.2.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaTCOGS2:TC013507-RA; TCOGS2:TC013507-PA; TCOGS2:TC013507.
GeneID661504.
KEGGtca:661504.

Phylogenomic databases

KOK05619.
OMAWQIIDST.
OrthoDBEOG43XSJH.
PhylomeDBD6WL52.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49309. Transglut_C. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD6WL52_TRICA
AccessionPrimary (citable) accession number: D6WL52
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info