Skip Header

Contribute Send feedback
Read comments (?) or add your own

D6WG53 (D6WG53_TRICA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL EFA00202.1
Gene names
ORF Names:TcasGA2_TC003027 EMBL EFA00202.1
OrganismTribolium castaneum (Red flour beetle) [Complete proteome]
Taxonomic identifier7070 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Coleoptera › Polyphaga › Cucujiformia › Tenebrionidae › Tenebrionidae incertae sedis › Tribolium

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexonuclease activity

Inferred from electronic annotation. Source: InterPro

nucleic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D6WG53 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 910E04263B324B71

FASTA63171,740
        10         20         30         40         50         60 
MKSKSTKRIE NKKKKMAALI EISRLNEYDR NLKKTQISEA NGSNSSELEP SVKKPRTEAP 

        70         80         90        100        110        120 
IGDTVEQKTL LPELGPSGKP KLSGLELQEL KKMLREKTTK MRQQPVFKLR DMGTNASLST 

       130        140        150        160        170        180 
DLENRVPLFL SDLQHLIMYS QLGHHAPYSP ARWCALEKFN KLSTTCLLVV ENMTVNHYTT 

       190        200        210        220        230        240 
HENIFPFVSS TFEHKLEILA PNSSNSDVVR ELSMVPLTAT QVKKFSTKFG TLEDAVHRTT 

       250        260        270        280        290        300 
EVFDSVRSLF PIEKDKESKN GLSMDLPFTD RFPRTQLLLS GWQMVEENFP LPIKGLMETK 

       310        320        330        340        350        360 
YAGYVLTKDR YEDVTPFSKM FGIDCEMCKT TIGDLELTRV SVVDEHLNTF YDTLVKPDNR 

       370        380        390        400        410        420 
ITDYLTRFSG ITYKMMRNIT TRLKDVQDDL RRLLPADAIL VGQSLGNDLH ALKMMHPYVI 

       430        440        450        460        470        480 
DTSVIFNITG DRSRKTKLKT LTEEFLSEKI QEGQGGHCST EDSLASLKLA QLKLRKSLYF 

       490        500        510        520        530        540 
GDAVMGNVHN EIRTCPELGT YNYATSMLKQ TTKLDKTALV VCPEEITSKY KYCVDKGAEV 

       550        560        570        580        590        600 
RQQNEKIKFF SEKSCKEVVR KMCDSLGMFS LNIGHVKLQE GQLEGTKVFK NVDKWVKEIY 

       610        620        630 
EKMPTPGLVI VLFPGVEGSN GCCFIQLKRD V

« Hide

References

« Hide 'large scale' references
[1]"The genome of the model beetle and pest Tribolium castaneum."
Tribolium Genome Sequencing Consortium
Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D. expand/collapse author list , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Georgia GA2 EMBL EFA00202.1.
[2]"BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Georgia GA2 EMBL EFA00202.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000278 Genomic DNA. Translation: EFA00202.1.
RefSeqXP_971901.1. XM_966808.1.

3D structure databases

ProteinModelPortalD6WG53.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaTCOGS2:TC003027-RA; TCOGS2:TC003027-PA; TCOGS2:TC003027.
GeneID660590.
KEGGtca:660590.

Phylogenomic databases

KOK14570.
OMATTHENIF.
OrthoDBEOG49P8DJ.
PhylomeDBD6WG53.

Family and domain databases

InterProIPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamPF00929. RNase_T. 1 hit.
[Graphical view]
SMARTSM00479. EXOIII. 1 hit.
[Graphical view]
SUPFAMSSF53098. RNaseH_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD6WG53_TRICA
AccessionPrimary (citable) accession number: D6WG53
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info