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D6WFD9

- D6WFD9_TRICA

UniProt

D6WFD9 - D6WFD9_TRICA

Protein
Submitted name:

Putative uncharacterized protein

Gene

TcasGA2_TC003094

Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. chromatin binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:TcasGA2_TC003094Imported
    OrganismiTribolium castaneum (Red flour beetle)Imported
    Taxonomic identifieri7070 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
    ProteomesiUP000007266: Linkage group 3

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains SET domain.SAAS annotation

    Phylogenomic databases

    KOiK11430.
    OMAiNRDDKES.
    OrthoDBiEOG7VB2DR.
    PhylomeDBiD6WFD9.

    Family and domain databases

    InterProiIPR026489. CXC_dom.
    IPR001005. SANT/Myb.
    IPR001214. SET_dom.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00717. SANT. 2 hits.
    SM00317. SET. 1 hit.
    [Graphical view]
    PROSITEiPS51633. CXC. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D6WFD9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKVKVSNEW KRHVKQEYIR LRQQKRFKRA DDVKLAWNQN RIKMTENLIA    50
    EQKRWTESKA FWVPLPEIPS HVTCMKKAEV IGNEGDIQVT PIRIINAVTP 100
    IPTMYTWAPI QQNFMVEDET VLHNIPYMGD DLLDQDGTFI EELIKNYDGK 150
    VHGDRESGFI DDELFVELVH ALMQYQDSDK GEKKDKDKEK TKEEEKKKGL 200
    DFPAFIIFQA ISSQFPDKGD PEELREKYIE LTERTDPNAP PECTPNIDGP 250
    KAASVPREQT MHSFHTLFCR RCFKYDCFLH RLQACHPGPN LQKRRGPDLK 300
    PFTEPCSADC YMLLESVKER MAAKAKQEEE AKGKSVTEAG SSTEAKTNGN 350
    SNPRKVCKQQ SVDSGNEASS EDSNDSNKYK DSTDQDQVST TTSFSLLGLM 400
    GANDHKEWTG SDESLFRGLH KIFLNNYCAI AQIMLTKTCQ QVYEFAQKED 450
    ADIPDEEAMR DYTPPRKKKK KHRLWSVHCR KIQLKKESNS NHVYNFTPCD 500
    HPGQSCDTQC PCIGAQNFCE KFCQCSSDCQ NRFPGCRCKA QCNTKQCPCY 550
    LAVRECDPDL CQTCGADQFD ISKITCKNVS VQRGLHKHLL MAPSDVAGWG 600
    IFLKDSAQKN EFISEYCGEI ISQDEADRRG KVYDKYMCSF LFNLNNDFVV 650
    DATRKGNKIR FANHSINPNC YAKVMMVNGD HRIGIFAKRA IQPGEELFFD 700
    YRYGPTEQLK FVGIEREMEF L 721
    Length:721
    Mass (Da):82,733
    Last modified:August 10, 2010 - v1
    Checksum:i1806D634FA80D888
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000278 Genomic DNA. Translation: EFA00261.1.
    RefSeqiXP_001811652.1. XM_001811600.2.
    UniGeneiTca.10830.

    Genome annotation databases

    EnsemblMetazoaiTCOGS2:TC003094-RA; TCOGS2:TC003094-PA; TCOGS2:TC003094.
    GeneIDi659759.
    KEGGitca:659759.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000278 Genomic DNA. Translation: EFA00261.1 .
    RefSeqi XP_001811652.1. XM_001811600.2.
    UniGenei Tca.10830.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai TCOGS2:TC003094-RA ; TCOGS2:TC003094-PA ; TCOGS2:TC003094 .
    GeneIDi 659759.
    KEGGi tca:659759.

    Phylogenomic databases

    KOi K11430.
    OMAi NRDDKES.
    OrthoDBi EOG7VB2DR.
    PhylomeDBi D6WFD9.

    Family and domain databases

    InterProi IPR026489. CXC_dom.
    IPR001005. SANT/Myb.
    IPR001214. SET_dom.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00717. SANT. 2 hits.
    SM00317. SET. 1 hit.
    [Graphical view ]
    PROSITEi PS51633. CXC. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the model beetle and pest Tribolium castaneum."
      Tribolium Genome Sequencing Consortium
      Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
      , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
      Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Georgia GA2Imported.
    2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
      Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
      Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: Georgia GA2Imported.

    Entry informationi

    Entry nameiD6WFD9_TRICA
    AccessioniPrimary (citable) accession number: D6WFD9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3