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Protein
Submitted name:

Putative uncharacterized protein

Gene

TcasGA2_TC003094

Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. chromatin binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:TcasGA2_TC003094Imported
OrganismiTribolium castaneum (Red flour beetle)Imported
Taxonomic identifieri7070 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
ProteomesiUP000007266 Componenti: Linkage group 3

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

InParanoidiD6WFD9.
KOiK11430.
OMAiNRDDKES.
OrthoDBiEOG7VB2DR.
PhylomeDBiD6WFD9.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D6WFD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKVKVSNEW KRHVKQEYIR LRQQKRFKRA DDVKLAWNQN RIKMTENLIA
60 70 80 90 100
EQKRWTESKA FWVPLPEIPS HVTCMKKAEV IGNEGDIQVT PIRIINAVTP
110 120 130 140 150
IPTMYTWAPI QQNFMVEDET VLHNIPYMGD DLLDQDGTFI EELIKNYDGK
160 170 180 190 200
VHGDRESGFI DDELFVELVH ALMQYQDSDK GEKKDKDKEK TKEEEKKKGL
210 220 230 240 250
DFPAFIIFQA ISSQFPDKGD PEELREKYIE LTERTDPNAP PECTPNIDGP
260 270 280 290 300
KAASVPREQT MHSFHTLFCR RCFKYDCFLH RLQACHPGPN LQKRRGPDLK
310 320 330 340 350
PFTEPCSADC YMLLESVKER MAAKAKQEEE AKGKSVTEAG SSTEAKTNGN
360 370 380 390 400
SNPRKVCKQQ SVDSGNEASS EDSNDSNKYK DSTDQDQVST TTSFSLLGLM
410 420 430 440 450
GANDHKEWTG SDESLFRGLH KIFLNNYCAI AQIMLTKTCQ QVYEFAQKED
460 470 480 490 500
ADIPDEEAMR DYTPPRKKKK KHRLWSVHCR KIQLKKESNS NHVYNFTPCD
510 520 530 540 550
HPGQSCDTQC PCIGAQNFCE KFCQCSSDCQ NRFPGCRCKA QCNTKQCPCY
560 570 580 590 600
LAVRECDPDL CQTCGADQFD ISKITCKNVS VQRGLHKHLL MAPSDVAGWG
610 620 630 640 650
IFLKDSAQKN EFISEYCGEI ISQDEADRRG KVYDKYMCSF LFNLNNDFVV
660 670 680 690 700
DATRKGNKIR FANHSINPNC YAKVMMVNGD HRIGIFAKRA IQPGEELFFD
710 720
YRYGPTEQLK FVGIEREMEF L
Length:721
Mass (Da):82,733
Last modified:August 9, 2010 - v1
Checksum:i1806D634FA80D888
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000278 Genomic DNA. Translation: EFA00261.1.
RefSeqiXP_001811652.1. XM_001811600.2.

Genome annotation databases

EnsemblMetazoaiTC003094-RA; TC003094-PA; TC003094.
GeneIDi659759.
KEGGitca:659759.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000278 Genomic DNA. Translation: EFA00261.1.
RefSeqiXP_001811652.1. XM_001811600.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiTC003094-RA; TC003094-PA; TC003094.
GeneIDi659759.
KEGGitca:659759.

Phylogenomic databases

InParanoidiD6WFD9.
KOiK11430.
OMAiNRDDKES.
OrthoDBiEOG7VB2DR.
PhylomeDBiD6WFD9.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the model beetle and pest Tribolium castaneum."
    Tribolium Genome Sequencing Consortium
    Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
    , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
    Nature 452:949-955(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Georgia GA2Imported.
  2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
    Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
    Nucleic Acids Res. 38:D437-D442(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: Georgia GA2Imported.

Entry informationi

Entry nameiD6WFD9_TRICA
AccessioniPrimary (citable) accession number: D6WFD9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 9, 2010
Last sequence update: August 9, 2010
Last modified: March 3, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.