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D6WFD9

- D6WFD9_TRICA

UniProt

D6WFD9 - D6WFD9_TRICA

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Protein
Submitted name:

Putative uncharacterized protein

Gene
TcasGA2_TC003094
Organism
Tribolium castaneum (Red flour beetle)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. chromatin binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:TcasGA2_TC003094Imported
OrganismiTribolium castaneum (Red flour beetle)
Taxonomic identifieri7070 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium
ProteomesiUP000007266: Linkage group 3

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotations

Phylogenomic databases

KOiK11430.
OMAiNRDDKES.
OrthoDBiEOG7VB2DR.
PhylomeDBiD6WFD9.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D6WFD9-1 [UniParc]FASTAAdd to Basket

« Hide

MSKVKVSNEW KRHVKQEYIR LRQQKRFKRA DDVKLAWNQN RIKMTENLIA    50
EQKRWTESKA FWVPLPEIPS HVTCMKKAEV IGNEGDIQVT PIRIINAVTP 100
IPTMYTWAPI QQNFMVEDET VLHNIPYMGD DLLDQDGTFI EELIKNYDGK 150
VHGDRESGFI DDELFVELVH ALMQYQDSDK GEKKDKDKEK TKEEEKKKGL 200
DFPAFIIFQA ISSQFPDKGD PEELREKYIE LTERTDPNAP PECTPNIDGP 250
KAASVPREQT MHSFHTLFCR RCFKYDCFLH RLQACHPGPN LQKRRGPDLK 300
PFTEPCSADC YMLLESVKER MAAKAKQEEE AKGKSVTEAG SSTEAKTNGN 350
SNPRKVCKQQ SVDSGNEASS EDSNDSNKYK DSTDQDQVST TTSFSLLGLM 400
GANDHKEWTG SDESLFRGLH KIFLNNYCAI AQIMLTKTCQ QVYEFAQKED 450
ADIPDEEAMR DYTPPRKKKK KHRLWSVHCR KIQLKKESNS NHVYNFTPCD 500
HPGQSCDTQC PCIGAQNFCE KFCQCSSDCQ NRFPGCRCKA QCNTKQCPCY 550
LAVRECDPDL CQTCGADQFD ISKITCKNVS VQRGLHKHLL MAPSDVAGWG 600
IFLKDSAQKN EFISEYCGEI ISQDEADRRG KVYDKYMCSF LFNLNNDFVV 650
DATRKGNKIR FANHSINPNC YAKVMMVNGD HRIGIFAKRA IQPGEELFFD 700
YRYGPTEQLK FVGIEREMEF L 721
Length:721
Mass (Da):82,733
Last modified:August 10, 2010 - v1
Checksum:i1806D634FA80D888
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000278 Genomic DNA. Translation: EFA00261.1.
RefSeqiXP_001811652.1. XM_001811600.2.
UniGeneiTca.10830.

Genome annotation databases

EnsemblMetazoaiTCOGS2:TC003094-RA; TCOGS2:TC003094-PA; TCOGS2:TC003094.
GeneIDi659759.
KEGGitca:659759.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000278 Genomic DNA. Translation: EFA00261.1 .
RefSeqi XP_001811652.1. XM_001811600.2.
UniGenei Tca.10830.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai TCOGS2:TC003094-RA ; TCOGS2:TC003094-PA ; TCOGS2:TC003094 .
GeneIDi 659759.
KEGGi tca:659759.

Phylogenomic databases

KOi K11430.
OMAi NRDDKES.
OrthoDBi EOG7VB2DR.
PhylomeDBi D6WFD9.

Family and domain databases

InterProi IPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view ]
PROSITEi PS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the model beetle and pest Tribolium castaneum."
    Tribolium Genome Sequencing Consortium
    Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D.
    , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
    Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Georgia GA2Imported.
  2. "BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
    Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
    Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: Georgia GA2Imported.

Entry informationi

Entry nameiD6WFD9_TRICA
AccessioniPrimary (citable) accession number: D6WFD9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: September 3, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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