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D6WFD9 (D6WFD9_TRICA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:TcasGA2_TC003094 EMBL EFA00261.1
OrganismTribolium castaneum (Red flour beetle) [Complete proteome]
Taxonomic identifier7070 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaColeopteraPolyphagaCucujiformiaTenebrionidaeTenebrionidae incertae sedisTribolium

Protein attributes

Sequence length721 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionchromatin binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D6WFD9 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 1806D634FA80D888

FASTA72182,733
        10         20         30         40         50         60 
MSKVKVSNEW KRHVKQEYIR LRQQKRFKRA DDVKLAWNQN RIKMTENLIA EQKRWTESKA 

        70         80         90        100        110        120 
FWVPLPEIPS HVTCMKKAEV IGNEGDIQVT PIRIINAVTP IPTMYTWAPI QQNFMVEDET 

       130        140        150        160        170        180 
VLHNIPYMGD DLLDQDGTFI EELIKNYDGK VHGDRESGFI DDELFVELVH ALMQYQDSDK 

       190        200        210        220        230        240 
GEKKDKDKEK TKEEEKKKGL DFPAFIIFQA ISSQFPDKGD PEELREKYIE LTERTDPNAP 

       250        260        270        280        290        300 
PECTPNIDGP KAASVPREQT MHSFHTLFCR RCFKYDCFLH RLQACHPGPN LQKRRGPDLK 

       310        320        330        340        350        360 
PFTEPCSADC YMLLESVKER MAAKAKQEEE AKGKSVTEAG SSTEAKTNGN SNPRKVCKQQ 

       370        380        390        400        410        420 
SVDSGNEASS EDSNDSNKYK DSTDQDQVST TTSFSLLGLM GANDHKEWTG SDESLFRGLH 

       430        440        450        460        470        480 
KIFLNNYCAI AQIMLTKTCQ QVYEFAQKED ADIPDEEAMR DYTPPRKKKK KHRLWSVHCR 

       490        500        510        520        530        540 
KIQLKKESNS NHVYNFTPCD HPGQSCDTQC PCIGAQNFCE KFCQCSSDCQ NRFPGCRCKA 

       550        560        570        580        590        600 
QCNTKQCPCY LAVRECDPDL CQTCGADQFD ISKITCKNVS VQRGLHKHLL MAPSDVAGWG 

       610        620        630        640        650        660 
IFLKDSAQKN EFISEYCGEI ISQDEADRRG KVYDKYMCSF LFNLNNDFVV DATRKGNKIR 

       670        680        690        700        710        720 
FANHSINPNC YAKVMMVNGD HRIGIFAKRA IQPGEELFFD YRYGPTEQLK FVGIEREMEF 


L 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the model beetle and pest Tribolium castaneum."
Tribolium Genome Sequencing Consortium
Richards S., Gibbs R.A., Weinstock G.M., Brown S.J., Denell R., Beeman R.W., Gibbs R., Beeman R.W., Brown S.J., Bucher G., Friedrich M., Grimmelikhuijzen C.J., Klingler M., Lorenzen M., Richards S., Roth S., Schroder R., Tautz D. expand/collapse author list , Zdobnov E.M., Muzny D., Gibbs R.A., Weinstock G.M., Attaway T., Bell S., Buhay C.J., Chandrabose M.N., Chavez D., Clerk-Blankenburg K.P., Cree A., Dao M., Davis C., Chacko J., Dinh H., Dugan-Rocha S., Fowler G., Garner T.T., Garnes J., Gnirke A., Hawes A., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Jackson L., Kovar C., Kowis A., Lee S., Lewis L.R., Margolis J., Morgan M., Nazareth L.V., Nguyen N., Okwuonu G., Parker D., Richards S., Ruiz S.J., Santibanez J., Savard J., Scherer S.E., Schneider B., Sodergren E., Tautz D., Vattahil S., Villasana D., White C.S., Wright R., Park Y., Beeman R.W., Lord J., Oppert B., Lorenzen M., Brown S., Wang L., Savard J., Tautz D., Richards S., Weinstock G., Gibbs R.A., Liu Y., Worley K., Weinstock G., Elsik C.G., Reese J.T., Elhaik E., Landan G., Graur D., Arensburger P., Atkinson P., Beeman R.W., Beidler J., Brown S.J., Demuth J.P., Drury D.W., Du Y.Z., Fujiwara H., Lorenzen M., Maselli V., Osanai M., Park Y., Robertson H.M., Tu Z., Wang J.J., Wang S., Richards S., Song H., Zhang L., Sodergren E., Werner D., Stanke M., Morgenstern B., Solovyev V., Kosarev P., Brown G., Chen H.C., Ermolaeva O., Hlavina W., Kapustin Y., Kiryutin B., Kitts P., Maglott D., Pruitt K., Sapojnikov V., Souvorov A., Mackey A.J., Waterhouse R.M., Wyder S., Zdobnov E.M., Zdobnov E.M., Wyder S., Kriventseva E.V., Kadowaki T., Bork P., Aranda M., Bao R., Beermann A., Berns N., Bolognesi R., Bonneton F., Bopp D., Brown S.J., Bucher G., Butts T., Chaumot A., Denell R.E., Ferrier D.E., Friedrich M., Gordon C.M., Jindra M., Klingler M., Lan Q., Lattorff H.M., Laudet V., von Levetsow C., Liu Z., Lutz R., Lynch J.A., da Fonseca R.N., Posnien N., Reuter R., Roth S., Savard J., Schinko J.B., Schmitt C., Schoppmeier M., Schroder R., Shippy T.D., Simonnet F., Marques-Souza H., Tautz D., Tomoyasu Y., Trauner J., Van der Zee M., Vervoort M., Wittkopp N., Wimmer E.A., Yang X., Jones A.K., Sattelle D.B., Ebert P.R., Nelson D., Scott J.G., Beeman R.W., Muthukrishnan S., Kramer K.J., Arakane Y., Beeman R.W., Zhu Q., Hogenkamp D., Dixit R., Oppert B., Jiang H., Zou Z., Marshall J., Elpidina E., Vinokurov K., Oppert C., Zou Z., Evans J., Lu Z., Zhao P., Sumathipala N., Altincicek B., Vilcinskas A., Williams M., Hultmark D., Hetru C., Jiang H., Grimmelikhuijzen C.J., Hauser F., Cazzamali G., Williamson M., Park Y., Li B., Tanaka Y., Predel R., Neupert S., Schachtner J., Verleyen P., Raible F., Bork P., Friedrich M., Walden K.K., Robertson H.M., Angeli S., Foret S., Bucher G., Schuetz S., Maleszka R., Wimmer E.A., Beeman R.W., Lorenzen M., Tomoyasu Y., Miller S.C., Grossmann D., Bucher G.
Nature 452:949-955(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Georgia GA2 EMBL EFA00261.1.
[2]"BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum."
Kim H.S., Murphy T., Xia J., Caragea D., Park Y., Beeman R.W., Lorenzen M.D., Butcher S., Manak J.R., Brown S.J.
Nucleic Acids Res. 38:D437-D442(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Georgia GA2 EMBL EFA00261.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000278 Genomic DNA. Translation: EFA00261.1.
RefSeqXP_001811652.1. XM_001811600.1.
UniGeneTca.10830.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaTCOGS2:TC003094-RA; TCOGS2:TC003094-PA; TCOGS2:TC003094.
GeneID659759.
KEGGtca:659759.

Phylogenomic databases

KOK11430.
OMANRDDKES.
OrthoDBEOG7VB2DR.
PhylomeDBD6WFD9.

Family and domain databases

InterProIPR026489. CXC_dom.
IPR001005. SANT/Myb.
IPR001214. SET_dom.
[Graphical view]
PfamPF00856. SET. 1 hit.
[Graphical view]
SMARTSM00717. SANT. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEPS51633. CXC. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD6WFD9_TRICA
AccessionPrimary (citable) accession number: D6WFD9
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 13, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)