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Protein
Submitted name:

Syntaxin-4

Gene

Stx4a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Syntaxin-4Imported
Gene namesi
Name:Stx4aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:893577. Stx4a.

Subcellular locationi

GO - Cellular componenti

  • basolateral plasma membrane Source: MGI
  • cell surface Source: MGI
  • cytoplasm Source: MGI
  • dendritic spine Source: MGI
  • endomembrane system Source: GO_Central
  • endosome Source: MGI
  • extracellular exosome Source: MGI
  • extracellular space Source: MGI
  • integral component of membrane Source: GO_Central
  • intracellular Source: MGI
  • lamellipodium Source: MGI
  • membrane Source: MGI
  • plasma membrane Source: MGI
  • SNARE complex Source: MGI
  • somatodendritic compartment Source: MGI
  • specific granule Source: MGI
  • storage vacuole Source: MGI
  • synapse Source: MGI
  • synaptic vesicle Source: GO_Central
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiD6RJ29.
ExpressionAtlasiD6RJ29. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033075.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119200.

Sequencei

Sequence statusi: Complete.

D6RJ29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MRDRTHELRQ GDNISDDEDE VRVALVVHSG AARLGSPDDE FFQKPSW
Length:47
Mass (Da):5,383
Last modified:July 13, 2010 - v1
Checksum:i93F28BD938DE5D25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC149222 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000156537; ENSMUSP00000118034; ENSMUSG00000030805.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC149222 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000033075.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000156537; ENSMUSP00000118034; ENSMUSG00000030805.

Organism-specific databases

MGIiMGI:893577. Stx4a.

Phylogenomic databases

GeneTreeiENSGT00760000119200.

Miscellaneous databases

NextBioi35552713.
SOURCEiSearch...

Gene expression databases

BgeeiD6RJ29.
ExpressionAtlasiD6RJ29. baseline and differential.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  2. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD6RJ29_MOUSE
AccessioniPrimary (citable) accession number: D6RJ29
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.