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D6RCL5

- D6RCL5_HUMAN

UniProt

D6RCL5 - D6RCL5_HUMAN

Protein
Submitted name:

Probable E3 ubiquitin-protein ligase HERC4

Gene

HERC4

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Probable E3 ubiquitin-protein ligase HERC4Imported
    Gene namesi
    Name:HERC4Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 10

    Organism-specific databases

    HGNCiHGNC:24521. HERC4.

    Expressioni

    Gene expression databases

    ArrayExpressiD6RCL5.
    BgeeiD6RCL5.

    Structurei

    3D structure databases

    ProteinModelPortaliD6RCL5.
    SMRiD6RCL5. Positions 1-239.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000020996.

    Family and domain databases

    Gene3Di2.130.10.30. 1 hit.
    InterProiIPR009091. RCC1/BLIP-II.
    IPR000408. Reg_chr_condens.
    [Graphical view]
    PfamiPF00415. RCC1. 4 hits.
    [Graphical view]
    PRINTSiPR00633. RCCNDNSATION.
    SUPFAMiSSF50985. SSF50985. 1 hit.
    PROSITEiPS00626. RCC1_2. 2 hits.
    PS50012. RCC1_3. 4 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    D6RCL5-1 [UniParc]FASTAAdd to Basket

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    MLCWGNASFG QLGLGGIDEE IVLEPRKSDF FINKRVRDVG CGLRHTVFVL    50
    DDGTVYTCGC NDLGQLGHEK SRKKPEQVVA LDAQNIVAVS CGEAHTLALN 100
    DKGQVYAWGL DSDGQLGLVG SEECIRVPSC FPKIMCVDSL VRICSGLSYG 150
    RIRNIKSLSD IQIVQVACGY YHSLALSKAS EVFCWGQNKY GQLGLGTDCK 200
    KQTSPQLLKS LLGIPFMQVA AGGAHSFVLT LSGAIFGWGR 240
    Length:240
    Mass (Da):25,895
    Last modified:July 13, 2010 - v1
    Checksum:i188C67596F9C9883
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei240 – 2401Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC024258 Genomic DNA. No translation available.
    AL133551 Genomic DNA. No translation available.
    AL356741 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000513996; ENSP00000427191; ENSG00000148634.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC024258 Genomic DNA. No translation available.
    AL133551 Genomic DNA. No translation available.
    AL356741 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali D6RCL5.
    SMRi D6RCL5. Positions 1-239.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000513996 ; ENSP00000427191 ; ENSG00000148634 .

    Organism-specific databases

    HGNCi HGNC:24521. HERC4.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000020996.

    Miscellaneous databases

    ChiTaRSi HERC4. human.
    NextBioi 35493857.

    Gene expression databases

    ArrayExpressi D6RCL5.
    Bgeei D6RCL5.

    Family and domain databases

    Gene3Di 2.130.10.30. 1 hit.
    InterProi IPR009091. RCC1/BLIP-II.
    IPR000408. Reg_chr_condens.
    [Graphical view ]
    Pfami PF00415. RCC1. 4 hits.
    [Graphical view ]
    PRINTSi PR00633. RCCNDNSATION.
    SUPFAMi SSF50985. SSF50985. 1 hit.
    PROSITEi PS00626. RCC1_2. 2 hits.
    PS50012. RCC1_3. 4 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and comparative analysis of human chromosome 10."
      Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
      , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
      Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiD6RCL5_HUMAN
    AccessioniPrimary (citable) accession number: D6RCL5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3