Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Nicastrin

Gene

Ncstn

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
NicastrinImported
Gene namesi
Name:NcstnImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 1

Organism-specific databases

MGIiMGI:1891700. Ncstn.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 35HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000003458.
ExpressionAtlasiD6RCJ2. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003550.

Structurei

3D structure databases

ProteinModelPortaliD6RCJ2.
SMRiD6RCJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2657. Eukaryota.
ENOG410XT6X. LUCA.
GeneTreeiENSGT00390000014633.
HOGENOMiHOG000185997.

Family and domain databases

InterProiView protein in InterPro
IPR008710. Nicastrin.
PANTHERiPTHR21092. PTHR21092. 1 hit.

Sequencei

Sequence statusi: Complete.

D6RCJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTRGGSGP DPGSRGLLLL SFSVVLAGLC GGNSVERKIY IPLNKTAPCV
60
RLLNATHQIG CQ
Length:62
Mass (Da):6,410
Last modified:July 13, 2010 - v1
Checksum:iD1E33F6B0B6F1121
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158930 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000140643; ENSMUSP00000119128; ENSMUSG00000003458.
ENSMUST00000146137; ENSMUSP00000120663; ENSMUSG00000003458.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC158930 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliD6RCJ2.
SMRiD6RCJ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000003550.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000140643; ENSMUSP00000119128; ENSMUSG00000003458.
ENSMUST00000146137; ENSMUSP00000120663; ENSMUSG00000003458.

Organism-specific databases

MGIiMGI:1891700. Ncstn.

Phylogenomic databases

eggNOGiKOG2657. Eukaryota.
ENOG410XT6X. LUCA.
GeneTreeiENSGT00390000014633.
HOGENOMiHOG000185997.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000003458.
ExpressionAtlasiD6RCJ2. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR008710. Nicastrin.
PANTHERiPTHR21092. PTHR21092. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD6RCJ2_MOUSE
AccessioniPrimary (citable) accession number: D6RCJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: April 12, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.