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Protein
Submitted name:

Protocadherin Fat 1

Gene

FAT1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protocadherin Fat 1Imported
Gene namesi
Name:FAT1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 4

Organism-specific databases

EuPathDBiHostDB:ENSG00000083857.13
HGNCiHGNC:3595 FAT1

Subcellular locationi

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000083857

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500308733322 – 488Sequence analysisAdd BLAST467

Proteomic databases

MaxQBiD6RCE4
PeptideAtlasiD6RCE4
PRIDEiD6RCE4

Expressioni

Gene expression databases

BgeeiENSG00000083857
ExpressionAtlasiD6RCE4 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliD6RCE4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 147CAInterPro annotationAdd BLAST87
Domaini171 – 255CAInterPro annotationAdd BLAST85
Domaini276 – 358CAInterPro annotationAdd BLAST83
Domaini385 – 461CAInterPro annotationAdd BLAST77

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1219 Eukaryota
ENOG410XPEI LUCA
GeneTreeiENSGT00760000118805
HOGENOMiHOG000046499

Family and domain databases

InterProiView protein in InterPro
IPR002126 Cadherin
IPR015919 Cadherin-like
PfamiView protein in Pfam
PF00028 Cadherin, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 4 hits
SUPFAMiSSF49313 SSF49313, 4 hits

Sequencei

Sequence statusi: Fragment.

D6RCE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRHLALLLL LLLLFQHFGD SDGSQRLEQT PLQFTHLEYN VTVQENSAAK
60 70 80 90 100
TYVGHPVKMG VYITHPAWEV RYKIVSGDSE NLFKAEEYIL GDFCFLRIRT
110 120 130 140 150
KGGNTAILNR EVKDHYTLIV KALEKNTNVE ARTKVRVQVL DTNDLRPLFS
160 170 180 190 200
PTSYSVSLPE NTAIRTSIAR VSATDADIGT NGEFYYSFKD RTDMFAIHPT
210 220 230 240 250
SGVIVLTGRL DYLETKLYEM EILAADRGMK LYGSSGISSM AKLTVHIEQA
260 270 280 290 300
NECAPVITAV TLSPSELDRD PAYAIVTVDD CDQGANGDIA SLSIVAGDLL
310 320 330 340 350
QQFRTVRSFP GSKEYKVKAI GGIDWDSHPF GYNLTLQAKD KGTPPQFSSV
360 370 380 390 400
KVIHVTSPQF KAGPVKFEKD VYRAEISEFA PPNTPVVMVK AIPAYSHLRY
410 420 430 440 450
VFKSTPGKAK FSLNYNTGLI SILEPVKRQQ AAHFELEVTT SDRKASTKVL
460 470 480
VKVLGANSNP PEFTQTAYKA AFDENVPIGT TVMSLSAV
Length:488
Mass (Da):53,921
Last modified:July 13, 2010 - v1
Checksum:i70A24EAA1C0692F8
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei488Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC107050 Genomic DNA No translation available.
AC110761 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000509647; ENSP00000423736; ENSG00000083857
UCSCiuc063bpe.1 human

Similar proteinsi

Entry informationi

Entry nameiD6RCE4_HUMAN
AccessioniPrimary (citable) accession number: D6RCE4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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