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Protein
Submitted name:

Probable ATP-dependent RNA helicase YTHDC2

Gene

YTHDC2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Probable ATP-dependent RNA helicase YTHDC2Imported
Gene namesi
Name:YTHDC2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 5

Organism-specific databases

EuPathDBiHostDB:ENSG00000047188.15.
HGNCiHGNC:24721. YTHDC2.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000047188.

PTM / Processingi

Proteomic databases

MaxQBiD6R9T8.
PaxDbiD6R9T8.
PeptideAtlasiD6R9T8.
PRIDEiD6R9T8.

Expressioni

Gene expression databases

BgeeiENSG00000047188.
ExpressionAtlasiD6R9T8. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD6R9T8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 46R3HInterPro annotationAdd BLAST46

Phylogenomic databases

eggNOGiKOG0920. Eukaryota.
KOG0922. Eukaryota.
KOG1902. Eukaryota.
COG1643. LUCA.
GeneTreeiENSGT00760000119189.

Family and domain databases

Gene3Di3.30.1370.50. 1 hit.
InterProiView protein in InterPro
IPR001374. R3H_dom.
IPR036867. R3H_dom_sf.
IPR031083. YTHDC2-related.
PANTHERiPTHR18934:SF125. PTHR18934:SF125. 1 hit.
PfamiView protein in Pfam
PF01424. R3H. 1 hit.
SUPFAMiSSF82708. SSF82708. 1 hit.
PROSITEiView protein in PROSITE
PS51061. R3H. 1 hit.

Sequencei

Sequence statusi: Fragment.

D6R9T8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREMEFPSSL TSTERAFIHR LSQSLGLVSK SKGKGANRYL TVKKKDGSET
60 70 80 90 100
AHAMMTCNLT HNTKHAVRSL IQRFPVTNKE RTELLPKTER GNVFAVEAEN
110 120 130
REMSKTSGRL NNGIPQIPVK RGESEFDSFR QSLPVFE
Length:137
Mass (Da):15,496
Last modified:July 13, 2010 - v1
Checksum:iA28EE5FFF21CF81C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei137Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010389 Genomic DNA. No translation available.
AC093208 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000514720; ENSP00000422916; ENSG00000047188.
UCSCiuc063gcb.1. human.

Entry informationi

Entry nameiD6R9T8_HUMAN
AccessioniPrimary (citable) accession number: D6R9T8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 25, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported