D6GS78 (D6GS78_FILAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribose 5-phosphate isomerase B EMBL EFE28519.1

Gene names

Ordered Locus Names:

HMPREF0389_00434 EMBL EFE28519.1

Organism

Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis) [Complete proteome] [HAMAP] EMBL EFE28519.1

Taxonomic identifier

546269 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Filifactor › Filifactor alocis

Protein attributes

Sequence length	147 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL EFE28519.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pentose-phosphate shunt Inferred from electronic annotation. Source: InterPro
Molecular_function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6GS78 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: E1003D840C5AB80F	FASTA	147	16,112
	10 20 30 40 50 60 MRIALGSDHG GYRLKEAIKE HLTKKGHFVT DYGTDSIESV DYPDYAEKLC HGILNGEADR 70 80 90 100 110 120 GILICGTGIG IAIAANKVKG IRCATVSDVF SAKKCVEHNN CQVMSLGERT IGFGLALELA 130 140 EAFLTATFEG DRHQRRVDKI MEIENQK

References

[1]

"The genome sequence of Filifactor alocis strain ATCC 35896." The Broad Institute Genome Sequencing Platform Ward D., Earl A., Feldgarden M., Young S.K., Gargeya S., Zeng Q., Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D. , Howarth C., Mehta T., Neiman D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., White J., Yandava C., Izard J., Blanton J.M., Baranova O.V., Tanner A.C., Dewhirst F.E., Haas B., Nusbaum C., Birren B. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35896 / D40 B5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002390 Genomic DNA. Translation: EFE28519.1.
RefSeq	YP_005053947.1. NC_016630.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EFE28519; EFE28519; HMPREF0389_00434.
GeneID	11569696.
KEGG	faa:HMPREF0389_00434.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01808.
OMA	DDMNVLC.
Family and domain databases
Gene3D	3.40.1400.10. 1 hit.
InterPro	IPR003500. Rib/Gal_isomrase. IPR004785. RpiB. [Graphical view]
PANTHER	PTHR30345. PTHR30345. 1 hit.
Pfam	PF02502. LacAB_rpiB. 1 hit. [Graphical view]
PIRSF	PIRSF005384. RpiB_LacA_B. 1 hit.
SUPFAM	SSF89623. Rib/Gal_isomrase. 1 hit.
TIGRFAMs	TIGR01120. rpiB. 1 hit. TIGR00689. rpiB_lacA_lacB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D6GS78_FILAD

Accession

Primary (citable) accession number: D6GS78

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)