D6GQC5 (D6GQC5_FILAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cobalt import ATP-binding protein CbiO 1 EMBL EFE28978.1

Gene names

Ordered Locus Names:

HMPREF0389_00900 EMBL EFE28978.1

Organism

Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis) [Complete proteome] [HAMAP] EMBL EFE28978.1

Taxonomic identifier

546269 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Filifactor › Filifactor alocis

Protein attributes

Sequence length	286 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Peripheral membrane protein By similarity SAAS SAAS015856.
Sequence similarities	Belongs to the ABC transporter superfamily. RuleBase RU000684 Contains 1 ABC transporter domain. SAAS SAAS015856

Ontologies

Keywords
Biological process	Transport SAAS SAAS015856
Cellular component	Cell membrane SAAS SAAS015856 Membrane
Ligand	ATP-binding RuleBase RU000684 SAAS SAAS015856 EMBL EFE28978.1 Nucleotide-binding
Molecular function	Hydrolase SAAS SAAS015856
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D6GQC5 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: B978F0C98F258D8C	FASTA	286	31,971
	10 20 30 40 50 60 MSIKVEQLSH IYSPGTPFES VALKNVNFEV KNGEFIGLIG HTGSGKSTLI QHLNGLLKAT 70 80 90 100 110 120 SGKIYIDGMD LTSADVTLTD IRKKVGLVFQ YPEYQLFEET IEKDIAFGPS KLNLSAEEIT 130 140 150 160 170 180 KRVKEAMQMV GLNYEALKDK SPFELSGGQK RRVAIAGVLA MKPDILILDE PTAGLDPKGR 190 200 210 220 230 240 DEILNQIRVV QQTYGTTIIL VSHSMDDVSR LVNRLIVMNR GEVAFDGTPR QIFAHQKKME 250 260 270 280 SIGLGVPKVV ELSNRLREQG WEISEDILTL EEMKEAILKE WRKKQC

References

[1]

"The genome sequence of Filifactor alocis strain ATCC 35896." The Broad Institute Genome Sequencing Platform Ward D., Earl A., Feldgarden M., Young S.K., Gargeya S., Zeng Q., Alvarado L., Berlin A., Bochicchio J., Chapman S.B., Chen Z., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D. , Howarth C., Mehta T., Neiman D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., White J., Yandava C., Izard J., Blanton J.M., Baranova O.V., Tanner A.C., Dewhirst F.E., Haas B., Nusbaum C., Birren B. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35896 / D40 B5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002390 Genomic DNA. Translation: EFE28978.1.
RefSeq	YP_005055036.1. NC_016630.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EFE28978; EFE28978; HMPREF0389_00900.
GeneID	11570964.
KEGG	faa:HMPREF0389_00900.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K16787.
OMA	INDFNIT.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR015856. ABC_transpr_CbiO. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
PROSITE	PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. PS51246. CBIO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D6GQC5_FILAD

Accession

Primary (citable) accession number: D6GQC5

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)