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D6D732

- D6D732_9BACE

UniProt

D6D732 - D6D732_9BACE

Protein

Xylose isomerase

Gene

xylA

Organism
Bacteroides xylanisolvens XB1A
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei103 – 1031UniRule annotation
    Active sitei106 – 1061UniRule annotation
    Metal bindingi234 – 2341Magnesium 1UniRule annotation
    Metal bindingi270 – 2701Magnesium 1UniRule annotation
    Metal bindingi270 – 2701Magnesium 2UniRule annotation
    Metal bindingi273 – 2731Magnesium 2UniRule annotation
    Metal bindingi298 – 2981Magnesium 1UniRule annotation
    Metal bindingi309 – 3091Magnesium 2UniRule annotation
    Metal bindingi311 – 3111Magnesium 2UniRule annotation
    Metal bindingi341 – 3411Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    ORF Names:BXY_06060Imported
    OrganismiBacteroides xylanisolvens XB1AImported
    Taxonomic identifieri657309 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
    ProteomesiUP000008795: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD6D732.
    SMRiD6D732. Positions 4-438.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D6D732-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATKEFFPGI EKIKFEGKDS KNPMAFRYYD AEKVINGKKM KDWLRFAMAW    50
    WHTLCAEGGD QFGGGTKQFP WNSNADAIQA AKDKMDAGFE FMQKMGIEYY 100
    CFHDVDLVSE GASIEEYEAN LKAIVAYAKQ KQAETGIKLL WGTANVFGHA 150
    RYMNGAATNP DFDVVARAAV QIKNAIDATI ELGGQNYVFW GGREGYMSLL 200
    NTDQKREKEH LAKMLTIARD YARARGFKGT FLIEPKPMEP TKHQYDVDTE 250
    TVIGFLKAHG LDKDFKVNIE VNHATLAGHT FEHELAVAVD NGMLGSIDAN 300
    RGDYQNGWDT DQFPIDNYEL TQAMMQIIRN GGLGNGGTNF DAKTRRNSTD 350
    LEDIFIAHIA GMDAMARALE SAAALLNESP YKKMLADRYA SFDGGKGKEF 400
    EDGKLTLEDV VAYAKANGEP KQTSGKQELY EAILNMYC 438
    Length:438
    Mass (Da):48,891
    Last modified:July 13, 2010 - v1
    Checksum:i21E82BA66651997B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929033 Genomic DNA. Translation: CBK65827.1.
    RefSeqiYP_007791408.1. NC_021017.1.

    Genome annotation databases

    EnsemblBacteriaiCBK65827; CBK65827; BXY_06060.
    GeneIDi15191066.
    KEGGibxy:BXY_06060.
    PATRICi42753683. VBIBacXyl109951_4168.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP929033 Genomic DNA. Translation: CBK65827.1 .
    RefSeqi YP_007791408.1. NC_021017.1.

    3D structure databases

    ProteinModelPortali D6D732.
    SMRi D6D732. Positions 4-438.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBK65827 ; CBK65827 ; BXY_06060 .
    GeneIDi 15191066.
    KEGGi bxy:BXY_06060.
    PATRICi 42753683. VBIBacXyl109951_4168.

    Phylogenomic databases

    KOi K01805.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Bacteriodes xylanisolvens XB1A."
      metaHIT consortium -- http://www.metahit.eu/
      Pajon A., Turner K., Parkhill J., Bernalier A.
      Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: XB1AImported.

    Entry informationi

    Entry nameiD6D732_9BACE
    AccessioniPrimary (citable) accession number: D6D732
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3