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D6D732

- D6D732_9BACE

UniProt

D6D732 - D6D732_9BACE

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Protein

Xylose isomerase

Gene
xylA, BXY_06060
Organism
Bacteroides xylanisolvens XB1A
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031 By similarityUniRule annotation
Active sitei106 – 1061 By similarityUniRule annotation
Metal bindingi234 – 2341Magnesium 1 By similarityUniRule annotation
Metal bindingi270 – 2701Magnesium 1 By similarityUniRule annotation
Metal bindingi270 – 2701Magnesium 2 By similarityUniRule annotation
Metal bindingi273 – 2731Magnesium 2 By similarityUniRule annotation
Metal bindingi298 – 2981Magnesium 1 By similarityUniRule annotation
Metal bindingi309 – 3091Magnesium 2 By similarityUniRule annotation
Metal bindingi311 – 3111Magnesium 2 By similarityUniRule annotation
Metal bindingi341 – 3411Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:BXY_06060Imported
OrganismiBacteroides xylanisolvens XB1AImported
Taxonomic identifieri657309 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000008795: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliD6D732.
SMRiD6D732. Positions 4-438.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D6D732-1 [UniParc]FASTAAdd to Basket

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MATKEFFPGI EKIKFEGKDS KNPMAFRYYD AEKVINGKKM KDWLRFAMAW    50
WHTLCAEGGD QFGGGTKQFP WNSNADAIQA AKDKMDAGFE FMQKMGIEYY 100
CFHDVDLVSE GASIEEYEAN LKAIVAYAKQ KQAETGIKLL WGTANVFGHA 150
RYMNGAATNP DFDVVARAAV QIKNAIDATI ELGGQNYVFW GGREGYMSLL 200
NTDQKREKEH LAKMLTIARD YARARGFKGT FLIEPKPMEP TKHQYDVDTE 250
TVIGFLKAHG LDKDFKVNIE VNHATLAGHT FEHELAVAVD NGMLGSIDAN 300
RGDYQNGWDT DQFPIDNYEL TQAMMQIIRN GGLGNGGTNF DAKTRRNSTD 350
LEDIFIAHIA GMDAMARALE SAAALLNESP YKKMLADRYA SFDGGKGKEF 400
EDGKLTLEDV VAYAKANGEP KQTSGKQELY EAILNMYC 438
Length:438
Mass (Da):48,891
Last modified:July 13, 2010 - v1
Checksum:i21E82BA66651997B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP929033 Genomic DNA. Translation: CBK65827.1.
RefSeqiYP_007791408.1. NC_021017.1.

Genome annotation databases

EnsemblBacteriaiCBK65827; CBK65827; BXY_06060.
GeneIDi15191066.
KEGGibxy:BXY_06060.
PATRICi42753683. VBIBacXyl109951_4168.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP929033 Genomic DNA. Translation: CBK65827.1 .
RefSeqi YP_007791408.1. NC_021017.1.

3D structure databases

ProteinModelPortali D6D732.
SMRi D6D732. Positions 4-438.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBK65827 ; CBK65827 ; BXY_06060 .
GeneIDi 15191066.
KEGGi bxy:BXY_06060.
PATRICi 42753683. VBIBacXyl109951_4168.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Bacteriodes xylanisolvens XB1A."
    metaHIT consortium -- http://www.metahit.eu/
    Pajon A., Turner K., Parkhill J., Bernalier A.
    Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: XB1AImported.

Entry informationi

Entry nameiD6D732_9BACE
AccessioniPrimary (citable) accession number: D6D732
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 11, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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