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D6CKL8 (D6CKL8_THIS3) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Name:dadX EMBL CAZ87486.1
Ordered Locus Names:THI_0773 EMBL CAZ87486.1
OrganismThiomonas sp. (strain 3As) [Complete proteome] [HAMAP] EMBL CAZ87486.1
Taxonomic identifier426114 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Thiomonas

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL CAZ87486.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D6CKL8 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: D199E0FA28291FFF

FASTA36739,331
        10         20         30         40         50         60 
MPRPISAVIH TAALSHNLLR VRQATPASKV WAVVKANAYG HGIARAYGAL RTADGFALLD 

        70         80         90        100        110        120 
LTEAEKLRAL GWVGPILLLE GCFAPEDLAL CERLNLWHVV HCREQIDWLA VHRGNRTHRV 

       130        140        150        160        170        180 
FLKMNTGMNR VGFSPEAYAA AWERLNALPQ VGEITHMTHF ACADEAGGID EALARFARGV 

       190        200        210        220        230        240 
GHLPGERTLS NSAAALVHGA DPRVASDWVR PGIALYGSSP TGLALDAAHW KLRPAMSLRS 

       250        260        270        280        290        300 
ELIDIQHIAA GECVGYGARF TAPRPMRIGV VACGYADGYP RVAPNGTPIV VDGVRTQLVG 

       310        320        330        340        350        360 
RVSMDMITVD LEPVFAAGNQ PMIGSPVLLW GQDAQAELSI DEVAAAAGTL GYELMCALAA 


RVPVRVE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FP475956 Genomic DNA. Translation: CAZ87486.1.
RefSeqYP_003623329.1. NC_014145.1.

3D structure databases

ProteinModelPortalD6CKL8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAZ87486; CAZ87486; THI_0773.
GeneID13880580.
KEGGthi:THI_0773.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031446.
KOK01775.
OMAKFIHISN.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD6CKL8_THIS3
AccessionPrimary (citable) accession number: D6CKL8
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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