D5X4G3 (D5X4G3_THIK1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polar amino acid ABC transporter, inner membrane subunit EMBL ADG29764.1

Gene names

Ordered Locus Names:

Tint_0353

Organism

Thiomonas intermedia (strain K12) (Thiobacillus intermedius) [Complete proteome] [HAMAP]

Taxonomic identifier

75379 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › unclassified Burkholderiales › Burkholderiales Genera incertae sedis › Thiomonas › Thiomonas intermedia

Protein attributes

Sequence length	228 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478 Contains 1 ABC transmembrane type-1 domain. SAAS SAAS010065

Ontologies

Keywords
Biological process	Transport RuleBase RU000478 SAAS SAAS010065
Cellular component	Cell membrane SAAS SAAS010065 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS010065
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5X4G3 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: 0DF20D4844F26C76	FASTA	228	25,177
	10 20 30 40 50 60 MGDFDFGSIV SVLPFLLKGL TYTIQLTVVA AIGGTLLGIL LALARLSHLK WLSLLAAGYI 70 80 90 100 110 120 NLMRSIPLLL VIFWFYFLVP VMLQSITGSD YPPKIGAERS AYFTFILFEA AYFAEIVRAG 130 140 150 160 170 180 IQSIPKGQLG AAYALGLTYA QSMRLIILPQ ALRNMLPVLL TQTIVLFQDV SLVALLNVTD 190 200 210 220 FVGAAMKIAQ RDSRVVEMYT LVAVVYFVLS FLLSQGVKRL HQRIAIVR

References

[1]

"Complete sequence of Thiomonas intermedia K12." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Kerfeld C.A., Cannon G.C., Heinhorst S., Woyke T. Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 EMBL ADG29764.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002021 Genomic DNA. Translation: ADG29764.1.
RefSeq	YP_003642094.1. NC_014153.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG29764; ADG29764; Tint_0353.
GeneID	9151083.
KEGG	tin:Tint_0353.
PATRIC	38291176. VBIThiInt85915_0362.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000267552.
KO	K10002.
Enzyme and pathway databases
BioCyc	TINT75379:GH6C-355-MONOMER.
Family and domain databases
InterPro	IPR010065. AA_ABC_transptr_permease_3TM. IPR000515. BPD_transp. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5X4G3_THIK1

Accession

Primary (citable) accession number: D5X4G3

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 29, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)