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D5WMA0 (D5WMA0_BURSC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BC1002_6503 EMBL ADG20346.1
OrganismBurkholderia sp. (strain CCGE1002) [Complete proteome] [HAMAP] EMBL ADG20346.1
Taxonomic identifier640511 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5WMA0 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: BFEAE67439883A14

FASTA55463,817
        10         20         30         40         50         60 
MLNDLWYKNT IIYCLSVGTF MDANGDGVGD FQGLMRRLDY LQGLGMTTIW LMPFHPSPGR 

        70         80         90        100        110        120 
DNGYDVCDYY NVDPKYGTLG DFAEFTHACA QRGLRVIIDL VVNHTSDQHP WFLEARSDPA 

       130        140        150        160        170        180 
SKYRDWYVWS DDKPPDAQRG VAFPGVQKST WSFDKRARRW YFHRFYDFQP DLNTSNPHVQ 

       190        200        210        220        230        240 
AELLKIMGFW IQLGVSGFRM DAVPFVIATK GPMVRRHAEQ YDMLRTFREF LQWREGDAII 

       250        260        270        280        290        300 
LAEANVLPKS DLQYFGDEGE RMPMMFNFRV NQNTFYTLAT GNTKPLKDAL LATKPRPPTA 

       310        320        330        340        350        360 
QWGVFLRNHD ELDLGRLTPA QRASVFAAFA PDPDMQLYGR GIRRRLAPML SGDRRRLELA 

       370        380        390        400        410        420 
YSLMLSLPGT PVFRYGDEIG MGDDLRRPER QCARTPMQWS GEPQGGFTSH SNPPVPAIAG 

       430        440        450        460        470        480 
GAYGFERVNV AKQRRDPDSF LNWTERMVRM RREVPEISWG DFEVLPTSRN DVLALCYHWR 

       490        500        510        520        530        540 
NNSVLFLHNF RAEACTVEFR LSSNEPGRDS LINLLSDDHS DADDDGCHTV VLEPFGYRWY 

       550 
RVGGLDYLLR RTEV 

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References

[1]"Complete sequence of chromosome 3 of Burkholderia sp. CCGE1002."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCGE1002.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002015 Genomic DNA. Translation: ADG20346.1.
RefSeqYP_003609857.1. NC_014119.1.

3D structure databases

ProteinModelPortalD5WMA0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG20346; ADG20346; BC1002_6503.
GeneID9091880.
KEGGbge:BC1002_6503.
PATRIC37222039. VBIBurSp41388_6544.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000220639.
KOK05343.

Enzyme and pathway databases

BioCycBSP640511:GJ7J-6598-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameD5WMA0_BURSC
AccessionPrimary (citable) accession number: D5WMA0
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: November 13, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)