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D5WMA0

- D5WMA0_BURSC

UniProt

D5WMA0 - D5WMA0_BURSC

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Protein
Submitted name:

Alpha amylase catalytic region

Gene

BC1002_6503

Organism
Burkholderia sp. (strain CCGE1002)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBSP640511:GJ7J-6598-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:BC1002_6503Imported
OrganismiBurkholderia sp. (strain CCGE1002)Imported
Taxonomic identifieri640511 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000002190: Chromosome 3

Structurei

3D structure databases

ProteinModelPortaliD5WMA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

D5WMA0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MLNDLWYKNT IIYCLSVGTF MDANGDGVGD FQGLMRRLDY LQGLGMTTIW
60 70 80 90 100
LMPFHPSPGR DNGYDVCDYY NVDPKYGTLG DFAEFTHACA QRGLRVIIDL
110 120 130 140 150
VVNHTSDQHP WFLEARSDPA SKYRDWYVWS DDKPPDAQRG VAFPGVQKST
160 170 180 190 200
WSFDKRARRW YFHRFYDFQP DLNTSNPHVQ AELLKIMGFW IQLGVSGFRM
210 220 230 240 250
DAVPFVIATK GPMVRRHAEQ YDMLRTFREF LQWREGDAII LAEANVLPKS
260 270 280 290 300
DLQYFGDEGE RMPMMFNFRV NQNTFYTLAT GNTKPLKDAL LATKPRPPTA
310 320 330 340 350
QWGVFLRNHD ELDLGRLTPA QRASVFAAFA PDPDMQLYGR GIRRRLAPML
360 370 380 390 400
SGDRRRLELA YSLMLSLPGT PVFRYGDEIG MGDDLRRPER QCARTPMQWS
410 420 430 440 450
GEPQGGFTSH SNPPVPAIAG GAYGFERVNV AKQRRDPDSF LNWTERMVRM
460 470 480 490 500
RREVPEISWG DFEVLPTSRN DVLALCYHWR NNSVLFLHNF RAEACTVEFR
510 520 530 540 550
LSSNEPGRDS LINLLSDDHS DADDDGCHTV VLEPFGYRWY RVGGLDYLLR

RTEV
Length:554
Mass (Da):63,817
Last modified:July 13, 2010 - v1
Checksum:iBFEAE67439883A14
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002015 Genomic DNA. Translation: ADG20346.1.
RefSeqiWP_013094133.1. NC_014119.1.
YP_003609857.1. NC_014119.1.

Genome annotation databases

EnsemblBacteriaiADG20346; ADG20346; BC1002_6503.
GeneIDi9091880.
KEGGibge:BC1002_6503.
PATRICi37222039. VBIBurSp41388_6544.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002015 Genomic DNA. Translation: ADG20346.1 .
RefSeqi WP_013094133.1. NC_014119.1.
YP_003609857.1. NC_014119.1.

3D structure databases

ProteinModelPortali D5WMA0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG20346 ; ADG20346 ; BC1002_6503 .
GeneIDi 9091880.
KEGGi bge:BC1002_6503.
PATRICi 37222039. VBIBurSp41388_6544.

Phylogenomic databases

HOGENOMi HOG000220639.
KOi K05343.

Enzyme and pathway databases

BioCyci BSP640511:GJ7J-6598-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 3 of Burkholderia sp. CCGE1002."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1002Imported.

Entry informationi

Entry nameiD5WMA0_BURSC
AccessioniPrimary (citable) accession number: D5WMA0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 29, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3