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D5WMA0

- D5WMA0_BURSC

UniProt

D5WMA0 - D5WMA0_BURSC

Protein
Submitted name:

Alpha amylase catalytic region

Gene

BC1002_6503

Organism
Burkholderia sp. (strain CCGE1002)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciBSP640511:GJ7J-6598-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:BC1002_6503Imported
    OrganismiBurkholderia sp. (strain CCGE1002)Imported
    Taxonomic identifieri640511 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000002190: Chromosome 3

    Structurei

    3D structure databases

    ProteinModelPortaliD5WMA0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000220639.
    KOiK05343.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    D5WMA0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLNDLWYKNT IIYCLSVGTF MDANGDGVGD FQGLMRRLDY LQGLGMTTIW    50
    LMPFHPSPGR DNGYDVCDYY NVDPKYGTLG DFAEFTHACA QRGLRVIIDL 100
    VVNHTSDQHP WFLEARSDPA SKYRDWYVWS DDKPPDAQRG VAFPGVQKST 150
    WSFDKRARRW YFHRFYDFQP DLNTSNPHVQ AELLKIMGFW IQLGVSGFRM 200
    DAVPFVIATK GPMVRRHAEQ YDMLRTFREF LQWREGDAII LAEANVLPKS 250
    DLQYFGDEGE RMPMMFNFRV NQNTFYTLAT GNTKPLKDAL LATKPRPPTA 300
    QWGVFLRNHD ELDLGRLTPA QRASVFAAFA PDPDMQLYGR GIRRRLAPML 350
    SGDRRRLELA YSLMLSLPGT PVFRYGDEIG MGDDLRRPER QCARTPMQWS 400
    GEPQGGFTSH SNPPVPAIAG GAYGFERVNV AKQRRDPDSF LNWTERMVRM 450
    RREVPEISWG DFEVLPTSRN DVLALCYHWR NNSVLFLHNF RAEACTVEFR 500
    LSSNEPGRDS LINLLSDDHS DADDDGCHTV VLEPFGYRWY RVGGLDYLLR 550
    RTEV 554
    Length:554
    Mass (Da):63,817
    Last modified:July 13, 2010 - v1
    Checksum:iBFEAE67439883A14
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002015 Genomic DNA. Translation: ADG20346.1.
    RefSeqiWP_013094133.1. NC_014119.1.
    YP_003609857.1. NC_014119.1.

    Genome annotation databases

    EnsemblBacteriaiADG20346; ADG20346; BC1002_6503.
    GeneIDi9091880.
    KEGGibge:BC1002_6503.
    PATRICi37222039. VBIBurSp41388_6544.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002015 Genomic DNA. Translation: ADG20346.1 .
    RefSeqi WP_013094133.1. NC_014119.1.
    YP_003609857.1. NC_014119.1.

    3D structure databases

    ProteinModelPortali D5WMA0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADG20346 ; ADG20346 ; BC1002_6503 .
    GeneIDi 9091880.
    KEGGi bge:BC1002_6503.
    PATRICi 37222039. VBIBurSp41388_6544.

    Phylogenomic databases

    HOGENOMi HOG000220639.
    KOi K05343.

    Enzyme and pathway databases

    BioCyci BSP640511:GJ7J-6598-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 3 of Burkholderia sp. CCGE1002."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCGE1002Imported.

    Entry informationi

    Entry nameiD5WMA0_BURSC
    AccessioniPrimary (citable) accession number: D5WMA0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3