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D5WEP3 (D5WEP3_BURSC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BC1002_5229 EMBL ADG19168.1
OrganismBurkholderia sp. (strain CCGE1002) [Complete proteome] [HAMAP] EMBL ADG19168.1
Taxonomic identifier640511 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length1155 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D5WEP3 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: B916F56743C72D52

FASTA1,155129,991
        10         20         30         40         50         60 
MKRDDPAQST HEAQTAAAVG TAAKVRTRRR GKPAALSDDP LWYKDAIIYQ VHIKSFFDAN 

        70         80         90        100        110        120 
NDGVGDFPGL IAKLDYIAEL GVNAIWLLPF YPSPRRDDGY DIADYRNVHP DYGQLADVRR 

       130        140        150        160        170        180 
FIQEAHARGI RVITELVINH TSDQHPWFQR ARRAKAGSNY RNYYVWSDTD QKYAETRIIF 

       190        200        210        220        230        240 
IDSEPSNWTH DPVAGAYYWH RFYSHQPDLN FDNPAVMREV LQVMRFWLDM GIDGLRLDAV 

       250        260        270        280        290        300 
PYLVEREGTN NENLPETHEI LKRIRATIDA EYPNRMLLAE ANQWPEDVKE YFGNEDECHM 

       310        320        330        340        350        360 
AFHFPLMPRI YMSIASEDRF PITDIMKQTP DLPNSNQWAI FLRNHDELTL EMVTDSERDY 

       370        380        390        400        410        420 
LWNTYASDRR ARLNLGIRRR LAPLMERDRR RIELINSLLL SMPGTPVIYY GDELGMGDNI 

       430        440        450        460        470        480 
HLGDRDGVRT PMQWSSDRNG GFSRADPELL VLPPVMGTLY GFDAVNVEAQ SRDPHSLLNW 

       490        500        510        520        530        540 
TRRMLSTRRS KQTFGRGTIR FLKPENRKIL AYLREMPGEA PILCVANLSR APQAVELDLS 

       550        560        570        580        590        600 
EFNGFVPIEM TADSVFPAIG QLTYLLTFPP YGFLWFMLCE GGGRPTWAQA HSEPLPEFVT 

       610        620        630        640        650        660 
IVIREGQTGP TPENVRLLES EVLPSWLSRR RWFASKDQKM HAVRLAALTT IPNGGFAFTE 

       670        680        690        700        710        720 
IEADVGDHTE RYVVPIALTW GGETTTPLFL QLALARVRRG RTVGHLTDAF SLPIFAHNVL 

       730        740        750        760        770        780 
RKMREHAVVP TVQKSEIKFL PTERFTELDN LGERPEIRWL AAEQSNSSLI IADAAVLKLV 

       790        800        810        820        830        840 
RRLVSGIHPE AEISRYLTQL GYANTAPLYG EVVRVDPEGV PHTLAILQGF IDNQGDAWNW 

       850        860        870        880        890        900 
SLDYLRRSVD ELAIAVDTET QTAPDRTNES ILLDGYGELA GIIGRRLGEL HVALATPSDD 

       910        920        930        940        950        960 
PAFAPEHANA EQVKTWVDAT QTMLASALDL LAPRIADMSD PDTKGLAQSL IDRRAALVEA 

       970        980        990       1000       1010       1020 
VDNLVPGDAG ALRIRIHGDF HLGQVLVAHG DAYLIDFEGE PARSLEERRQ KSSPLRDVAG 

      1030       1040       1050       1060       1070       1080 
LMRSLSYASA AAQSTTESAP QQTADRKRAL FERFRSHATT AFLAEYRAAA AQSSEPLVAP 

      1090       1100       1110       1120       1130       1140 
ESEEALLDLF LIEKAAYEIR YEAANRPTWL GLPVRGLAAL TSRLLGDTGA PPHYDPSTRV 

      1150 
SGSATPPNPA EGDYE 

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References

[1]"Complete sequence of chromosome 2 of Burkholderia sp. CCGE1002."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCGE1002.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002014 Genomic DNA. Translation: ADG19168.1.
RefSeqYP_003608679.1. NC_014118.1.

3D structure databases

ProteinModelPortalD5WEP3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG19168; ADG19168; BC1002_5229.
GeneID9114544.
KEGGbge:BC1002_5229.
PATRIC37219540. VBIBurSp41388_5312.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000268420.
KOK05343.

Enzyme and pathway databases

BioCycBSP640511:GJ7J-5310-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5WEP3_BURSC
AccessionPrimary (citable) accession number: D5WEP3
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: November 13, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)