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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

BC1002_3207

Organism
Burkholderia sp. (strain CCGE1002)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciBSP640511:GJ7J-3277-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:BC1002_3207Imported
OrganismiBurkholderia sp. (strain CCGE1002)Imported
Taxonomic identifieri640511 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000002190 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi640511.BC1002_3207.

Structurei

3D structure databases

ProteinModelPortaliD5WEH0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini37 – 160124RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini170 – 477308RuBisCO_largeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFTQDWAS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5WEH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDFSQPPIQ PEHQARDPHN PRERYAAGVM KYREMGYWQP DYEPKETDVI
60 70 80 90 100
ALFRITPQPG VEPEEAAAAV AGESSTATWT VVWTDRLTAC DMYRAKAYRV
110 120 130 140 150
EPVPASRADE PQYFAYIAYE LDLFEEGSVA NLTASIIGNV FGFKPLKALR
160 170 180 190 200
LEDMRIPVAY LKTFQGPPTG IVVERERLDK YGRPLLGATV KPKLGLSGKN
210 220 230 240 250
YGRVVYEGLR GGLDFLKDDE NINSQAFMHW RDRFLFAMEA VSRAQAETGE
260 270 280 290 300
VKGHYMNVTA GTMEDMYERA EFAKELGSCI VMIDLVIGWT AIQSMSRWAR
310 320 330 340 350
KHDMILHLHR AGHGTYTRQR NHGISFRVIA KWLRMAGVDH AHAGTAVGKL
360 370 380 390 400
EGDPLSVQGY YNVCRDAHNA VDLSRGLFFD QPWAGLRKVM PVASGGIHAG
410 420 430 440 450
QMHQLLDLFG DDAILQFGGG TIGHPAGIQA GATANRVALE AMVKARNEGR
460 470 480 490
DILREGPDVL EAAARWCTPL KQALDTWRDV TFNYASTDTP DFAATPTAA
Length:499
Mass (Da):55,451
Last modified:July 13, 2010 - v1
Checksum:iA63235F91877AC2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002014 Genomic DNA. Translation: ADG17252.1.
RefSeqiWP_013091055.1. NC_014118.1.

Genome annotation databases

EnsemblBacteriaiADG17252; ADG17252; BC1002_3207.
KEGGibge:BC1002_3207.
PATRICi37215466. VBIBurSp41388_3289.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002014 Genomic DNA. Translation: ADG17252.1.
RefSeqiWP_013091055.1. NC_014118.1.

3D structure databases

ProteinModelPortaliD5WEH0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi640511.BC1002_3207.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG17252; ADG17252; BC1002_3207.
KEGGibge:BC1002_3207.
PATRICi37215466. VBIBurSp41388_3289.

Phylogenomic databases

eggNOGiCOG1850. LUCA.
ENOG4105DT1. Bacteria.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFTQDWAS.

Enzyme and pathway databases

BioCyciBSP640511:GJ7J-3277-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia sp. CCGE1002."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1002Imported.

Entry informationi

Entry nameiD5WEH0_BURSC
AccessioniPrimary (citable) accession number: D5WEH0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: December 9, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.