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Protein
Submitted name:

ROK family protein

Gene

BC1002_5018

Organism
Burkholderia sp. (strain CCGE1002)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSP640511:GJ7J-5099-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ROK family proteinImported
Gene namesi
Ordered Locus Names:BC1002_5018Imported
OrganismiBurkholderia sp. (strain CCGE1002)Imported
Taxonomic identifieri640511 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000002190 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi640511.BC1002_5018.

Structurei

3D structure databases

ProteinModelPortaliD5WE11.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000150086.
KOiK00886.

Family and domain databases

InterProiIPR000600. ROK.
[Graphical view]
PfamiPF00480. ROK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5WE11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTRNKNAVK RNAPKSGSEH ILAIDVGGTG LKAAIIDANG QMKTERVRVA
60 70 80 90 100
TPHPCTPDQL VDALAQLVAP LIEQVQPVCI SIGFPGVVRN NRILTAPHFG
110 120 130 140 150
IEGWHDIALA DSLARRLGGL PVRMINDAEM QGFAAIEGRG LEFVLTLGTG
160 170 180 190 200
AGTAMFRDGE LMPHLELAHH PVSKKGVAYD EYIGEAAREQ VGNKRWNRRV
210 220 230 240 250
EKVIGILESL VNYDKLWIGG GNAARIKFAL PANVATVSND AGIEGGAKLW
260 270
HPLSVRETRQ YPEATEKTGR FEPK
Length:274
Mass (Da):29,670
Last modified:July 13, 2010 - v1
Checksum:iB1A040C044F24770
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002014 Genomic DNA. Translation: ADG18964.1.
RefSeqiWP_013092759.1. NC_014118.1.
YP_003608475.1. NC_014118.1.

Genome annotation databases

EnsemblBacteriaiADG18964; ADG18964; BC1002_5018.
KEGGibge:BC1002_5018.
PATRICi37219114. VBIBurSp41388_5100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002014 Genomic DNA. Translation: ADG18964.1.
RefSeqiWP_013092759.1. NC_014118.1.
YP_003608475.1. NC_014118.1.

3D structure databases

ProteinModelPortaliD5WE11.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi640511.BC1002_5018.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG18964; ADG18964; BC1002_5018.
KEGGibge:BC1002_5018.
PATRICi37219114. VBIBurSp41388_5100.

Phylogenomic databases

HOGENOMiHOG000150086.
KOiK00886.

Enzyme and pathway databases

BioCyciBSP640511:GJ7J-5099-MONOMER.

Family and domain databases

InterProiIPR000600. ROK.
[Graphical view]
PfamiPF00480. ROK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia sp. CCGE1002."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Martinez-Romero E., Hernandez M.A.R., Tiedje J.M., Woyke T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1002Imported.

Entry informationi

Entry nameiD5WE11_BURSC
AccessioniPrimary (citable) accession number: D5WE11
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.