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D5W038

- D5W038_CLOB2

UniProt

D5W038 - D5W038_CLOB2

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Protein
Submitted name: Glutamate decarboxylase
Gene
CBF_1964
Organism
Clostridium botulinum (strain 230613 / Type F)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciCBOT758678:GLBH-1964-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:CBF_1964Imported
OrganismiClostridium botulinum (strain 230613 / Type F)Imported
Taxonomic identifieri758678 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000002367: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiPTFQINF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D5W038-1 [UniParc]FASTAAdd to Basket

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MLYSSKNKQS NDTYATPIFG ITKDKYSIPK YKINENSIAP NIAYRMIKDE    50
LMNEGNARLN LATFCQTYME DKATKLMAET LQKNAIDKSE YPQTAEIENR 100
CVNIISDLWN VPKDMNFLGT STVGSSEACM LGGMSMKFRW RDQAKKLGID 150
INKKKPNLVI SSGYQVCWEK FCVYWDIEMR TVPMDEDNLS LNIDKILDYV 200
DEYTIGIIGI LGITYTGKFD DIKALDDAIE KYNSNHDIKV YIHVDAASGG 250
FFTPFINPEI LWDFRLKNVV SINASGHKYG LVYPGIGWIL WKDQEYLPKD 300
LIFEVSYLGG KMPTLAINFS RSGSQIIGQY YNFLRFGFEG YKKIHERTKE 350
VAMYISKELQ ATGLFSIYND GSNLPIVCYR LKEQSKVKWN LYDLSDRLAM 400
KGWQIPAYPL PENLNHIIIQ RIVCRSDLGY NLAELLIKDF KTAINDLNNA 450
HILFHEEENQ GIYGFTH 467
Length:467
Mass (Da):53,687
Last modified:July 13, 2010 - v1
Checksum:iA78716925055B664
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002011 Genomic DNA. Translation: ADF99652.1.
RefSeqiYP_005674853.1. NC_017297.1.

Genome annotation databases

EnsemblBacteriaiADF99652; ADF99652; CBF_1964.
GeneIDi12229828.
KEGGicbm:CBF_1964.
PATRICi36788615. VBICloBot152196_2014.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002011 Genomic DNA. Translation: ADF99652.1 .
RefSeqi YP_005674853.1. NC_017297.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADF99652 ; ADF99652 ; CBF_1964 .
GeneIDi 12229828.
KEGGi cbm:CBF_1964.
PATRICi 36788615. VBICloBot152196_2014.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.
OMAi PTFQINF.

Enzyme and pathway databases

BioCyci CBOT758678:GLBH-1964-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of a type F Clostridium botulinum strain."
    Tian R., Li T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 230613 / Type F.

Entry informationi

Entry nameiD5W038_CLOB2
AccessioniPrimary (citable) accession number: D5W038
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 14, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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