D5VUB2 (D5VUB2_METIM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADG12724.1

Gene names

Ordered Locus Names:

Metin_0052

Organism

Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) [Complete proteome] [HAMAP]

Taxonomic identifier

573063 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus › Methanocaldococcus infernus

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADG12724.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5VUB2 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: 2F201A58CCCD2BB4	FASTA	388	45,962
	10 20 30 40 50 60 MAEVKAYSLE NIAKKLNLEV RDISRAVKRK ILREYEYKDT KILLFKKEFK HIEKGTVVFL 70 80 90 100 110 120 NDNLDVVRGY PKTYRALTLY PTIKEHFIDK VVIEEKLNGY NIRVVYINDE FFALTRSGYI 130 140 150 160 170 180 CPFTTKKVKK YLKLDILKEY PNYMLCGEMI GLNNPYTPKF YEEAQQEDEN LAFYIFDIKE 190 200 210 220 230 240 RESNKSLTVE ERLKLCNIYK LPHVKPLAIV DKEKAHEKIK EIIKELEHKK REGVVLKDPN 250 260 270 280 290 300 MDVVPLKYTT HYTQCDDLRE AFKFFFDMGL DFLFSRVVRE GFMSYEFRES LEERKKRAKD 310 320 330 340 350 360 IGEAIILPMA ETIEKIASGE RVTEDIELIF DSEEDFYEYL EFLRKVKILV KIKDIKELNG 370 380 KLKVLIGKVY NKTNDKVLAY LNGTLWGE

References

[1]

"Complete sequence of Methanocaldococcus infernus ME." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T. Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 11812 / JCM 15783 / ME.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002009 Genomic DNA. Translation: ADG12724.1.
RefSeq	YP_003615688.1. NC_014122.1.
3D structure databases
ProteinModelPortal	D5VUB2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG12724; ADG12724; Metin_0052.
GeneID	9131051.
KEGG	mif:Metin_0052.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
Enzyme and pathway databases
BioCyc	MINF573063:GHL3-53-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5VUB2_METIM

Accession

Primary (citable) accession number: D5VUB2

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)