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D5VUB2 (D5VUB2_METIM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Metin_0052 EMBL ADG12724.1
OrganismMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) [Complete proteome] [HAMAP] EMBL ADG12724.1
Taxonomic identifier573063 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADG12724.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5VUB2 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 2F201A58CCCD2BB4

FASTA38845,962
        10         20         30         40         50         60 
MAEVKAYSLE NIAKKLNLEV RDISRAVKRK ILREYEYKDT KILLFKKEFK HIEKGTVVFL 

        70         80         90        100        110        120 
NDNLDVVRGY PKTYRALTLY PTIKEHFIDK VVIEEKLNGY NIRVVYINDE FFALTRSGYI 

       130        140        150        160        170        180 
CPFTTKKVKK YLKLDILKEY PNYMLCGEMI GLNNPYTPKF YEEAQQEDEN LAFYIFDIKE 

       190        200        210        220        230        240 
RESNKSLTVE ERLKLCNIYK LPHVKPLAIV DKEKAHEKIK EIIKELEHKK REGVVLKDPN 

       250        260        270        280        290        300 
MDVVPLKYTT HYTQCDDLRE AFKFFFDMGL DFLFSRVVRE GFMSYEFRES LEERKKRAKD 

       310        320        330        340        350        360 
IGEAIILPMA ETIEKIASGE RVTEDIELIF DSEEDFYEYL EFLRKVKILV KIKDIKELNG 

       370        380 
KLKVLIGKVY NKTNDKVLAY LNGTLWGE 

« Hide

References

[1]"Complete sequence of Methanocaldococcus infernus ME."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11812 / JCM 15783 / ME.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002009 Genomic DNA. Translation: ADG12724.1.
RefSeqYP_003615688.1. NC_014122.1.

3D structure databases

ProteinModelPortalD5VUB2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG12724; ADG12724; Metin_0052.
GeneID9131051.
KEGGmif:Metin_0052.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMINF573063:GHL3-53-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5VUB2_METIM
AccessionPrimary (citable) accession number: D5VUB2
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)