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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Metin_0052

Organism
Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMINF573063:G1GKS-55-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Metin_0052Imported
OrganismiMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)Imported
Taxonomic identifieri573063 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi

Interactioni

Protein-protein interaction databases

STRINGi573063.Metin_0052

Structurei

3D structure databases

ProteinModelPortaliD5VUB2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini90 – 241RNA_ligaseInterPro annotationAdd BLAST152

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili209 – 232Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

D5VUB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEVKAYSLE NIAKKLNLEV RDISRAVKRK ILREYEYKDT KILLFKKEFK
60 70 80 90 100
HIEKGTVVFL NDNLDVVRGY PKTYRALTLY PTIKEHFIDK VVIEEKLNGY
110 120 130 140 150
NIRVVYINDE FFALTRSGYI CPFTTKKVKK YLKLDILKEY PNYMLCGEMI
160 170 180 190 200
GLNNPYTPKF YEEAQQEDEN LAFYIFDIKE RESNKSLTVE ERLKLCNIYK
210 220 230 240 250
LPHVKPLAIV DKEKAHEKIK EIIKELEHKK REGVVLKDPN MDVVPLKYTT
260 270 280 290 300
HYTQCDDLRE AFKFFFDMGL DFLFSRVVRE GFMSYEFRES LEERKKRAKD
310 320 330 340 350
IGEAIILPMA ETIEKIASGE RVTEDIELIF DSEEDFYEYL EFLRKVKILV
360 370 380
KIKDIKELNG KLKVLIGKVY NKTNDKVLAY LNGTLWGE
Length:388
Mass (Da):45,962
Last modified:July 13, 2010 - v1
Checksum:i2F201A58CCCD2BB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002009 Genomic DNA Translation: ADG12724.1
RefSeqiWP_013099470.1, NC_014122.1

Genome annotation databases

EnsemblBacteriaiADG12724; ADG12724; Metin_0052
GeneIDi9131051
KEGGimif:Metin_0052

Entry informationi

Entry nameiD5VUB2_METIM
AccessioniPrimary (citable) accession number: D5VUB2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: March 28, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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