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D5VUB2

- D5VUB2_METIM

UniProt

D5VUB2 - D5VUB2_METIM

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Metin_0052

Organism
Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMINF573063:GHL3-53-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Metin_0052Imported
    OrganismiMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)Imported
    Taxonomic identifieri573063 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
    ProteomesiUP000002061: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5VUB2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5VUB2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEVKAYSLE NIAKKLNLEV RDISRAVKRK ILREYEYKDT KILLFKKEFK    50
    HIEKGTVVFL NDNLDVVRGY PKTYRALTLY PTIKEHFIDK VVIEEKLNGY 100
    NIRVVYINDE FFALTRSGYI CPFTTKKVKK YLKLDILKEY PNYMLCGEMI 150
    GLNNPYTPKF YEEAQQEDEN LAFYIFDIKE RESNKSLTVE ERLKLCNIYK 200
    LPHVKPLAIV DKEKAHEKIK EIIKELEHKK REGVVLKDPN MDVVPLKYTT 250
    HYTQCDDLRE AFKFFFDMGL DFLFSRVVRE GFMSYEFRES LEERKKRAKD 300
    IGEAIILPMA ETIEKIASGE RVTEDIELIF DSEEDFYEYL EFLRKVKILV 350
    KIKDIKELNG KLKVLIGKVY NKTNDKVLAY LNGTLWGE 388
    Length:388
    Mass (Da):45,962
    Last modified:July 13, 2010 - v1
    Checksum:i2F201A58CCCD2BB4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002009 Genomic DNA. Translation: ADG12724.1.
    RefSeqiYP_003615688.1. NC_014122.1.

    Genome annotation databases

    EnsemblBacteriaiADG12724; ADG12724; Metin_0052.
    GeneIDi9131051.
    KEGGimif:Metin_0052.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002009 Genomic DNA. Translation: ADG12724.1 .
    RefSeqi YP_003615688.1. NC_014122.1.

    3D structure databases

    ProteinModelPortali D5VUB2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADG12724 ; ADG12724 ; Metin_0052 .
    GeneIDi 9131051.
    KEGGi mif:Metin_0052.

    Phylogenomic databases

    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci MINF573063:GHL3-53-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Methanocaldococcus infernus ME."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 11812 / JCM 15783 / MEImported.

    Entry informationi

    Entry nameiD5VUB2_METIM
    AccessioniPrimary (citable) accession number: D5VUB2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3