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D5VUB2

- D5VUB2_METIM

UniProt

D5VUB2 - D5VUB2_METIM

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Metin_0052
Organism
Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMINF573063:GHL3-53-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Metin_0052Imported
OrganismiMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)Imported
Taxonomic identifieri573063 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000002061: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5VUB2.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

D5VUB2-1 [UniParc]FASTAAdd to Basket

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MAEVKAYSLE NIAKKLNLEV RDISRAVKRK ILREYEYKDT KILLFKKEFK    50
HIEKGTVVFL NDNLDVVRGY PKTYRALTLY PTIKEHFIDK VVIEEKLNGY 100
NIRVVYINDE FFALTRSGYI CPFTTKKVKK YLKLDILKEY PNYMLCGEMI 150
GLNNPYTPKF YEEAQQEDEN LAFYIFDIKE RESNKSLTVE ERLKLCNIYK 200
LPHVKPLAIV DKEKAHEKIK EIIKELEHKK REGVVLKDPN MDVVPLKYTT 250
HYTQCDDLRE AFKFFFDMGL DFLFSRVVRE GFMSYEFRES LEERKKRAKD 300
IGEAIILPMA ETIEKIASGE RVTEDIELIF DSEEDFYEYL EFLRKVKILV 350
KIKDIKELNG KLKVLIGKVY NKTNDKVLAY LNGTLWGE 388
Length:388
Mass (Da):45,962
Last modified:July 13, 2010 - v1
Checksum:i2F201A58CCCD2BB4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002009 Genomic DNA. Translation: ADG12724.1.
RefSeqiYP_003615688.1. NC_014122.1.

Genome annotation databases

EnsemblBacteriaiADG12724; ADG12724; Metin_0052.
GeneIDi9131051.
KEGGimif:Metin_0052.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002009 Genomic DNA. Translation: ADG12724.1 .
RefSeqi YP_003615688.1. NC_014122.1.

3D structure databases

ProteinModelPortali D5VUB2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG12724 ; ADG12724 ; Metin_0052 .
GeneIDi 9131051.
KEGGi mif:Metin_0052.

Phylogenomic databases

HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci MINF573063:GHL3-53-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Methanocaldococcus infernus ME."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 11812 / JCM 15783 / ME.

Entry informationi

Entry nameiD5VUB2_METIM
AccessioniPrimary (citable) accession number: D5VUB2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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