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Protein
Submitted name:

Alpha-amylase

Gene

Metin_0910

Organism
Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciMINF573063:GHL3-926-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:Metin_0910Imported
OrganismiMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME)Imported
Taxonomic identifieri573063 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000002061: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

D5VSM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLITFNFEVH QPHRLNKKIK EKEDLWERYV DTKLNKEVFN KVANNCYIPT
60 70 80 90 100
NLLLLELIDD YDFKVNFSIS GVFIEQAMEF NDYVLDLFKD LVKTGNVELI
110 120 130 140 150
GETYYHSLSS LHESEEEFIE DIEKHKKLYK EVFNFKPRVF RNTELIYNNR
160 170 180 190 200
IAKIVKDLGF EAIFTEGTEK VLEWRSPNYL YSSPDGMKVL LRNYRLSDDI
210 220 230 240 250
GFRFSARDWD QWPLTADKYA AWLSVTPGDL INIYMDYETF GEHHWKDSGI
260 270 280 290 300
FEFLRYLPQE IGKYEHLEVV NVSETLKLEP KGEIFVHEFS TISWADTERD
310 320 330 340 350
VSAWLGNKMQ IICYEKLKEI GELIKKNKKR FGKNFEKIYK IYKTLQISDH
360 370 380 390 400
LYYLSTKGLG DFEVHNYFSH YDTPYDAYAY FLNILYDFEY YLKEQLKDSL
410 420 430
ESEDFKVERV KKEKSIRKKR ESNVKYIIVE
Length:430
Mass (Da):51,551
Last modified:July 13, 2010 - v1
Checksum:i353104C0DC3B5B15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002009 Genomic DNA. Translation: ADG13574.1.
RefSeqiYP_003616538.1. NC_014122.1.

Genome annotation databases

EnsemblBacteriaiADG13574; ADG13574; Metin_0910.
GeneIDi9131924.
KEGGimif:Metin_0910.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002009 Genomic DNA. Translation: ADG13574.1.
RefSeqiYP_003616538.1. NC_014122.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG13574; ADG13574; Metin_0910.
GeneIDi9131924.
KEGGimif:Metin_0910.

Phylogenomic databases

HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Enzyme and pathway databases

BioCyciMINF573063:GHL3-926-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Methanocaldococcus infernus ME."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 11812 / JCM 15783 / MEImported.

Entry informationi

Entry nameiD5VSM1_METIM
AccessioniPrimary (citable) accession number: D5VSM1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: February 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.