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D5VSM1 (D5VSM1_METIM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ADG13574.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5VSM1 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 353104C0DC3B5B15

FASTA43051,551
        10         20         30         40         50         60 
MLITFNFEVH QPHRLNKKIK EKEDLWERYV DTKLNKEVFN KVANNCYIPT NLLLLELIDD 

        70         80         90        100        110        120 
YDFKVNFSIS GVFIEQAMEF NDYVLDLFKD LVKTGNVELI GETYYHSLSS LHESEEEFIE 

       130        140        150        160        170        180 
DIEKHKKLYK EVFNFKPRVF RNTELIYNNR IAKIVKDLGF EAIFTEGTEK VLEWRSPNYL 

       190        200        210        220        230        240 
YSSPDGMKVL LRNYRLSDDI GFRFSARDWD QWPLTADKYA AWLSVTPGDL INIYMDYETF 

       250        260        270        280        290        300 
GEHHWKDSGI FEFLRYLPQE IGKYEHLEVV NVSETLKLEP KGEIFVHEFS TISWADTERD 

       310        320        330        340        350        360 
VSAWLGNKMQ IICYEKLKEI GELIKKNKKR FGKNFEKIYK IYKTLQISDH LYYLSTKGLG 

       370        380        390        400        410        420 
DFEVHNYFSH YDTPYDAYAY FLNILYDFEY YLKEQLKDSL ESEDFKVERV KKEKSIRKKR 

       430 
ESNVKYIIVE 

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References

[1]"Complete sequence of Methanocaldococcus infernus ME."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11812 / JCM 15783 / ME.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002009 Genomic DNA. Translation: ADG13574.1.
RefSeqYP_003616538.1. NC_014122.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG13574; ADG13574; Metin_0910.
GeneID9131924.
KEGGmif:Metin_0910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000224113.
KOK07405.
OMAFEVHQPY.

Enzyme and pathway databases

BioCycMINF573063:GHL3-926-MONOMER.

Family and domain databases

Gene3D3.20.110.10. 1 hit.
InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMSSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5VSM1_METIM
AccessionPrimary (citable) accession number: D5VSM1
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)