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D5VSH2 (D5VSH2_METIM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable thymidylate kinase HAMAP-Rule MF_00165

EC=2.7.4.9 HAMAP-Rule MF_00165
Alternative name(s):
dTMP kinase HAMAP-Rule MF_00165
Gene names
Name:tmk HAMAP-Rule MF_00165
Ordered Locus Names:Metin_0861 EMBL ADG13525.1
OrganismMethanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) [Complete proteome] [HAMAP] EMBL ADG13525.1
Taxonomic identifier573063 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus

Protein attributes

Sequence length184 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + dTMP = ADP + dTDP. HAMAP-Rule MF_00165

Sequence similarities

Belongs to the thymidylate kinase family. HAMAP-Rule MF_00165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding7 – 148ATP By similarity HAMAP-Rule MF_00165

Sequences

Sequence LengthMass (Da)Tools
D5VSH2 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 50F61AE87095A13D

FASTA18421,139
        10         20         30         40         50         60 
MFIVFEGIDG SGKTTLSKML AKELSGYWTC EPTDGEIGRL IRSYLSSGNI DNISLSLLFA 

        70         80         90        100        110        120 
ADRVEHCKEI EKVLNSGRDV ICDRYLYSSI AYQSSLGVEE NFLWEINKYA IKPDLVFLLV 

       130        140        150        160        170        180 
VDVDEAMKRV KGKDIFENKN FLEKVQEKYL ELAKRFNFIV IDTTNISIEE AYNKVRVKVY 


ECKC 

« Hide

References

[1]"Complete sequence of Methanocaldococcus infernus ME."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Woyke T.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 11812 / JCM 15783 / ME.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002009 Genomic DNA. Translation: ADG13525.1.
RefSeqYP_003616489.1. NC_014122.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG13525; ADG13525; Metin_0861.
GeneID9131875.
KEGGmif:Metin_0861.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229077.
KOK00943.
OMARLIKEWA.

Enzyme and pathway databases

BioCycMINF573063:GHL3-877-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00165. Thymidylate_kinase.
InterProIPR027417. P-loop_NTPase.
IPR018095. Thymidylate_kin_CS.
IPR018094. Thymidylate_kinase.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00041. DTMP_kinase. 1 hit.
PROSITEPS01331. THYMIDYLATE_KINASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5VSH2_METIM
AccessionPrimary (citable) accession number: D5VSH2
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)