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D5VH57 (D5VH57_CAUST) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length360 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site371Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2571Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1351Substrate By similarity HAMAP-Rule MF_01201
Binding site3051Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue371N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D5VH57 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: DB62F87E4BA5DDA2

FASTA36038,289
        10         20         30         40         50         60 
MTDLHDARLT IDLDALAANH AALQARAGDA EVAPAVKANA YGLGAARVAD RLWAEGVRSF 

        70         80         90        100        110        120 
YVARLAEGVA LRAALGDREA AIYVLDGATP GAGDALEGAR LTPVLNSLPQ IEAWNAQARA 

       130        140        150        160        170        180 
GRLKAALHLD TGMNRLGLRP EELKVLLGAT DRLKRLDLEL VISHLACADV PDHPMNTRQL 

       190        200        210        220        230        240 
ERFSEAVAQL PNARKSFANS AGLFLGEAYR FDQARPGISL YGGGPEGRPH PEIRAVATVE 

       250        260        270        280        290        300 
APILQVRVVP RGETVGYGAT WTAPDTTRIA IVGAGYADGV PRASHPKGQV WFDGARRQML 

       310        320        330        340        350        360 
GRVSMDLMAV DVTDCDAARP GAMVELLGSN MPIDDAATAA GTTAYELLTN IAPRARRIYR 

« Hide

References

[1]"Genome sequences of eight morphologically diverse alphaproteobacteria."
US DOE Joint Genome Institute
Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.
J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002008 Genomic DNA. Translation: ADG10775.1.
RefSeqYP_003593393.1. NC_014100.1.

3D structure databases

ProteinModelPortalD5VH57.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG10775; ADG10775; Cseg_2315.
GeneID9103823.
KEGGcse:Cseg_2315.
PATRIC37204725. VBICauSeg118057_2364.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031445.
KOK01775.
OMAMAHFADA.

Enzyme and pathway databases

BioCycCSEG509190:GHVG-2351-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5VH57_CAUST
AccessionPrimary (citable) accession number: D5VH57
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: February 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)