D5VGH8 (D5VGH8_CAUST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675

Gene names

Ordered Locus Names:

Cseg_1823

Organism

Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) (Mycoplana segnis) [Complete proteome] [HAMAP]

Taxonomic identifier

509190 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Caulobacterales › Caulobacteraceae › Caulobacter › Caulobacter segnis

Protein attributes

Sequence length	617 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU000675 EMBL ADG10297.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5VGH8 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: 6BD26D3C8FC8CCB7	FASTA	617	68,809
	10 20 30 40 50 60 MKLFVRSMLY ATLTMSALAI LPSDARSAAP AHRFEVSGAG FLKDGAPHQV ISAEMHYVRI 70 80 90 100 110 120 PRAYWRDRLQ KAKTMGLNTI TTYAFWNVHE PRPGVYDFTG QNDLAAFIRA AQAEGLDVIL 130 140 150 160 170 180 RPGPYVCSEW ELGGYPSWLL KDRNVLLRST EPQYAAAVER WMARLGREVK PLLLKNGGPI 190 200 210 220 230 240 VAIQLENEYG AFGDDKAYLE GLEATYRRAG LADGVLFTSN QASDLAKGSL PHLPSMVNFG 250 260 270 280 290 300 SGGAEKSVAQ LETFRPDGLR MVGEYWAGWF DKWGEEHHET DGRKEAEELR FMLQRGYSVS 310 320 330 340 350 360 LYMFHGGTSF GWMNGADSHT GKDYHPDTTS YDYDAPLDEA GAPRYKYGLL ASVIAEVTGK 370 380 390 400 410 420 PAAPTPAASI AKTFPISPVK RSASLWRNLP EPVRADRPLT FEELDQNYGY VLYRVPLRPG 430 440 450 460 470 480 QGGVLTLKGV HSYAQIYVDQ KLVGVIDRRL DQETVTLPGR SRAATLDILV ENTGRVNYSR 490 500 510 520 530 540 AIRTEQAGLT GEVTLEGQPL NDWRMYRLPM DDLSKVRMSA EPCVGPCFYE VEMKVDQPAD 550 560 570 580 590 600 TYLDTRGLHK GQLWLGEHNL GRFWSIGPVH TLYTPAPWMR PGANRIVFFD LTGDAKERLT 610 TVNAPVFGKV TNTREAQ

References

[1]

"Genome sequences of eight morphologically diverse alphaproteobacteria." US DOE Joint Genome Institute Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V. J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002008 Genomic DNA. Translation: ADG10297.1.
RefSeq	YP_003592915.1. NC_014100.1.
3D structure databases
ProteinModelPortal	D5VGH8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG10297; ADG10297; Cseg_1823.
GeneID	9103326.
KEGG	cse:Cseg_1823.
PATRIC	37203721. VBICauSeg118057_1867.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000221607.
KO	K12308.
OMA	FLVENCG.
Enzyme and pathway databases
BioCyc	CSEG509190:GHVG-1853-MONOMER.
Family and domain databases
Gene3D	3.20.20.80. 1 hit.
InterPro	IPR026283. B-gal_1-like. IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_catalytic_dom. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR23421. PTHR23421. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PIRSF	PIRSF006336. B-gal. 1 hit.
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5VGH8_CAUST

Accession

Primary (citable) accession number: D5VGH8

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)