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D5VGH8 (D5VGH8_CAUST) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length617 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU000675 EMBL ADG10297.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5VGH8 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 6BD26D3C8FC8CCB7

FASTA61768,809
        10         20         30         40         50         60 
MKLFVRSMLY ATLTMSALAI LPSDARSAAP AHRFEVSGAG FLKDGAPHQV ISAEMHYVRI 

        70         80         90        100        110        120 
PRAYWRDRLQ KAKTMGLNTI TTYAFWNVHE PRPGVYDFTG QNDLAAFIRA AQAEGLDVIL 

       130        140        150        160        170        180 
RPGPYVCSEW ELGGYPSWLL KDRNVLLRST EPQYAAAVER WMARLGREVK PLLLKNGGPI 

       190        200        210        220        230        240 
VAIQLENEYG AFGDDKAYLE GLEATYRRAG LADGVLFTSN QASDLAKGSL PHLPSMVNFG 

       250        260        270        280        290        300 
SGGAEKSVAQ LETFRPDGLR MVGEYWAGWF DKWGEEHHET DGRKEAEELR FMLQRGYSVS 

       310        320        330        340        350        360 
LYMFHGGTSF GWMNGADSHT GKDYHPDTTS YDYDAPLDEA GAPRYKYGLL ASVIAEVTGK 

       370        380        390        400        410        420 
PAAPTPAASI AKTFPISPVK RSASLWRNLP EPVRADRPLT FEELDQNYGY VLYRVPLRPG 

       430        440        450        460        470        480 
QGGVLTLKGV HSYAQIYVDQ KLVGVIDRRL DQETVTLPGR SRAATLDILV ENTGRVNYSR 

       490        500        510        520        530        540 
AIRTEQAGLT GEVTLEGQPL NDWRMYRLPM DDLSKVRMSA EPCVGPCFYE VEMKVDQPAD 

       550        560        570        580        590        600 
TYLDTRGLHK GQLWLGEHNL GRFWSIGPVH TLYTPAPWMR PGANRIVFFD LTGDAKERLT 

       610 
TVNAPVFGKV TNTREAQ 

« Hide

References

[1]"Genome sequences of eight morphologically diverse alphaproteobacteria."
US DOE Joint Genome Institute
Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.
J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002008 Genomic DNA. Translation: ADG10297.1.
RefSeqYP_003592915.1. NC_014100.1.

3D structure databases

ProteinModelPortalD5VGH8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG10297; ADG10297; Cseg_1823.
GeneID9103326.
KEGGcse:Cseg_1823.
PATRIC37203721. VBICauSeg118057_1867.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000221607.
KOK12308.
OMARIPRVYW.

Enzyme and pathway databases

BioCycCSEG509190:GHVG-1853-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PIRSFPIRSF006336. B-gal. 1 hit.
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5VGH8_CAUST
AccessionPrimary (citable) accession number: D5VGH8
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 16, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)