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Protein
Submitted name:

Alpha-L-rhamnosidase

Gene

Cseg_1766

Organism
Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) (Mycoplana segnis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciCSEG509190:GHVG-1796-MONOMER.

Protein family/group databases

CAZyiCBM67. Carbohydrate-Binding Module Family 67.
GH78. Glycoside Hydrolase Family 78.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-L-rhamnosidaseImported
Gene namesi
Ordered Locus Names:Cseg_1766Imported
OrganismiCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) (Mycoplana segnis)Imported
Taxonomic identifieri509190 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
Proteomesi
  • UP000002629 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi509190.Cseg_1766.

Structurei

3D structure databases

ProteinModelPortaliD5VGC3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini325 – 495171Bac_rhamnosid_NInterPro annotationAdd
BLAST
Domaini505 – 1012508Bac_rhamnosidInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000244024.
KOiK05989.
OMAiAIGDWMY.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR008979. Galactose-bd-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49785. SSF49785. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5VGC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIDRRRVML LGGAGSLVVA QGEAAPLGAA AISDCRVCGL ETPLALGAAT
60 70 80 90 100
PRFSWRLSGP RPQAAYRITV ARSAADLSAP RDLVWDSGKV ASGQSFDIAF
110 120 130 140 150
GGPAAAPRQV FWWRVEAWDD KGARAVGRPA RWETGLLSAS DWNAAWLAAE
160 170 180 190 200
DATAKADRLA GVHWISGPES ITDKTSKRCY RTSFEVPAQS DGTLFLAASG
210 220 230 240 250
LAGVFLNGQE LAAGEEEPTR FTTMSPYPLA LRQGRNVIAI AQTPSRDLGG
260 270 280 290 300
PQPMLCALIR LGGSERRLST AEGWKTTVNA PEGWTLPDFD DGAWPAATTA
310 320 330 340 350
RNRPRGQPLP PGAATHLRRA FRLDKPVAQA RLYATALGAY EAWINGAPAD
360 370 380 390 400
ERKMAPEPTN LLERVLYQAY DVTAALRAGD NVLGLWVGDG WYASEFSANA
410 420 430 440 450
RFCFGPAPCR AMAQLEILFI DGSRQVIATD DQWRIAPSAI LTSEIYDGEV
460 470 480 490 500
YDARQEIKDW ALPGTPQGGW RPAETVEAPN LPIDPQVSPP IRVTQRLKPK
510 520 530 540 550
AVTSPKPGVH VFDFGQNFAG WAELAISGKA GTRIELLFGE YLKPDGQVDQ
560 570 580 590 600
ANLRTAFARD TYVLKGQGRE VWSPRFTYHG FRYVEVRGLA NAPAADLLTG
610 620 630 640 650
LVGHNDIRVS GVLRVGAPVV EQFWRNSVWS QRSNFFGLPT DCPQRDERLG
660 670 680 690 700
WLGDAAVFWP AAAYNMDVEA FTRRFMGDVR RAQRPDGQFP DCIPPFMVPS
710 720 730 740 750
SRSAPGWSDA GVILPYTAWR QYGDTGVIAE NWEAMERYLA FILAKNPDYL
760 770 780 790 800
WKSSKGNDYG DWLAVDAKYL GEATTPKDLI GTAFWAADAA MMRDMAKAIG
810 820 830 840 850
KAEAAERYRA LFEAIRAAFA GAYVQADGKI GNGSQTSYIL AIRFGLLSPE
860 870 880 890 900
QASEAGRRLA ADIAARGGKL STGFLGTPHI LDALADTGHE ATAVGLLLQR
910 920 930 940 950
DYPSWGYMVT KGATTMWERW NSDTGDLSMN SYNHYAFGAI GDFLFRRIAG
960 970 980 990 1000
LAAVEPGFAK VVIAPIFDRR LGSAGADYDS VSGRLSSNWR YEGDTVRLDL
1010 1020 1030 1040
SIPPGVQAEV VIPTAARAVR VDGRPVPSAR FRVERGQHRV VFTA
Length:1,044
Mass (Da):113,543
Last modified:July 13, 2010 - v1
Checksum:iAB693E438D7D1A6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002008 Genomic DNA. Translation: ADG10242.1.
RefSeqiWP_013078899.1. NC_014100.1.

Genome annotation databases

EnsemblBacteriaiADG10242; ADG10242; Cseg_1766.
KEGGicse:Cseg_1766.
PATRICi37203603. VBICauSeg118057_1808.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002008 Genomic DNA. Translation: ADG10242.1.
RefSeqiWP_013078899.1. NC_014100.1.

3D structure databases

ProteinModelPortaliD5VGC3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi509190.Cseg_1766.

Protein family/group databases

CAZyiCBM67. Carbohydrate-Binding Module Family 67.
GH78. Glycoside Hydrolase Family 78.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG10242; ADG10242; Cseg_1766.
KEGGicse:Cseg_1766.
PATRICi37203603. VBICauSeg118057_1808.

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000244024.
KOiK05989.
OMAiAIGDWMY.

Enzyme and pathway databases

BioCyciCSEG509190:GHVG-1796-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR008979. Galactose-bd-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49785. SSF49785. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059Imported.

Entry informationi

Entry nameiD5VGC3_CAUST
AccessioniPrimary (citable) accession number: D5VGC3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: July 6, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.