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D5VC98 (D5VC98_MORCR) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP-Rule MF_01201

EC=5.1.1.1 HAMAP-Rule MF_01201
Gene names
Name:alr EMBL ADG61301.1
Ordered Locus Names:MCR_1036 EMBL ADG61301.1
OrganismMoraxella catarrhalis (strain RH4) [Complete proteome] [HAMAP]
Taxonomic identifier749219 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeMoraxella

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2641Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1371Substrate By similarity HAMAP-Rule MF_01201
Binding site3161Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D5VC98 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 02A8FE3C9173AEF3

FASTA38041,586
        10         20         30         40         50         60 
MRSTSITIHP NALTHNLQII KSQLDRTTKV LAMVKADAYG HGIDATIPAL IHADGFGVAC 

        70         80         90        100        110        120 
LSEAMAVKQV LDGMNVKKPI VLIEGAFSLD EWKVAIDHDF GCLIHHENQL TWALSHRPKQ 

       130        140        150        160        170        180 
DQFCHTIWLK YNTGMSRLGF NDDHIITAAK SLADAGYRLI LTSHFACADD KSHPLNAQQI 

       190        200        210        220        230        240 
SKFDQALACI RSFAPDTLAS LCNSAGIFNF KHQHHDWVRA GIALYGSKPI TDQSAKALNL 

       250        260        270        280        290        300 
MPAMTLSAQV MAIHTLAAGD SIGYSALWAA QKPHQIAVVS IGYGDGYPRV VMGAKVSVTD 

       310        320        330        340        350        360 
TSGNRHLCDI IGRVAMDMFM IDIDGLDIAI NTPVVLWGDS PTIDEVAMCA GTIGYELMCR 

       370        380 
LTTRPKRCIM DTYLPKKEFK 

« Hide

References

[1]"Genome analysis of Moraxella catarrhalis strain RH4, a human respiratory tract pathogen."
de Vries S.P., van Hijum S.A., Schueler W., Riesbeck K., Hays J.P., Hermans P.W., Bootsma H.J.
J. Bacteriol. 192:3574-3583(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RH4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002005 Genomic DNA. Translation: ADG61301.1.
RefSeqYP_003627194.1. NC_014147.1.

3D structure databases

ProteinModelPortalD5VC98.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG61301; ADG61301; MCR_1036.
GeneID9135746.
KEGGmct:MCR_1036.
PATRIC38207923. VBIMorCat148474_1032.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031446.
KOK01775.
OMASVELWGD.

Enzyme and pathway databases

BioCycMCAT749219:GHBK-1060-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5VC98_MORCR
AccessionPrimary (citable) accession number: D5VC98
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: February 19, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)