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D5VC98

- D5VC98_MORCR

UniProt

D5VC98 - D5VC98_MORCR

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Protein
Alanine racemase
Gene
alr, MCR_1036
Organism
Moraxella catarrhalis (strain RH4)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotation

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei35 – 351Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei137 – 1371Substrate By similarityUniRule annotation
Active sitei264 – 2641Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei316 – 3161Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciMCAT749219:GHBK-1060-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Name:alrImported
Ordered Locus Names:MCR_1036Imported
OrganismiMoraxella catarrhalis (strain RH4)
Taxonomic identifieri749219 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeMoraxella
ProteomesiUP000000930: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei35 – 351N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD5VC98.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000031446.
KOiK01775.
OMAiLKYNTGM.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.

Sequencei

Sequence statusi: Complete.

D5VC98-1 [UniParc]FASTAAdd to Basket

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MRSTSITIHP NALTHNLQII KSQLDRTTKV LAMVKADAYG HGIDATIPAL    50
IHADGFGVAC LSEAMAVKQV LDGMNVKKPI VLIEGAFSLD EWKVAIDHDF 100
GCLIHHENQL TWALSHRPKQ DQFCHTIWLK YNTGMSRLGF NDDHIITAAK 150
SLADAGYRLI LTSHFACADD KSHPLNAQQI SKFDQALACI RSFAPDTLAS 200
LCNSAGIFNF KHQHHDWVRA GIALYGSKPI TDQSAKALNL MPAMTLSAQV 250
MAIHTLAAGD SIGYSALWAA QKPHQIAVVS IGYGDGYPRV VMGAKVSVTD 300
TSGNRHLCDI IGRVAMDMFM IDIDGLDIAI NTPVVLWGDS PTIDEVAMCA 350
GTIGYELMCR LTTRPKRCIM DTYLPKKEFK 380
Length:380
Mass (Da):41,586
Last modified:July 13, 2010 - v1
Checksum:i02A8FE3C9173AEF3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002005 Genomic DNA. Translation: ADG61301.1.
RefSeqiYP_003627194.1. NC_014147.1.

Genome annotation databases

EnsemblBacteriaiADG61301; ADG61301; MCR_1036.
GeneIDi9135746.
KEGGimct:MCR_1036.
PATRICi38207923. VBIMorCat148474_1032.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002005 Genomic DNA. Translation: ADG61301.1 .
RefSeqi YP_003627194.1. NC_014147.1.

3D structure databases

ProteinModelPortali D5VC98.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG61301 ; ADG61301 ; MCR_1036 .
GeneIDi 9135746.
KEGGi mct:MCR_1036.
PATRICi 38207923. VBIMorCat148474_1032.

Phylogenomic databases

HOGENOMi HOG000031446.
KOi K01775.
OMAi LKYNTGM.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci MCAT749219:GHBK-1060-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome analysis of Moraxella catarrhalis strain RH4, a human respiratory tract pathogen."
    de Vries S.P., van Hijum S.A., Schueler W., Riesbeck K., Hays J.P., Hermans P.W., Bootsma H.J.
    J. Bacteriol. 192:3574-3583(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RH4.

Entry informationi

Entry nameiD5VC98_MORCR
AccessioniPrimary (citable) accession number: D5VC98
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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