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Protein

Succinate dehydrogenase iron-sulfur subunit

Gene

Arnit_2668

Organism
Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) (Campylobacter nitrofigilis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • [2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation
  • [3Fe-4S] clusterUniRule annotationNote: Binds 1 [3Fe-4S] cluster.UniRule annotation
  • [4Fe-4S] clusterUniRule annotationNote: Binds 1 [4Fe-4S] cluster.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Ligand2Fe-2SUniRule annotation, 3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciANIT572480:G1GKP-2679-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase iron-sulfur subunitUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Ordered Locus Names:Arnit_2668Imported
OrganismiArcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) (Campylobacter nitrofigilis)Imported
Taxonomic identifieri572480 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeArcobacter
Proteomesi
  • UP000000939 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi572480.Arnit_2668

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 992Fe-2S ferredoxin-typeInterPro annotationAdd BLAST82
Domaini146 – 1754Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30

Sequence similaritiesi

Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E33 Bacteria
COG0479 LUCA
HOGENOMiHOG000160590
KOiK00245
OMAiESWIHTN
OrthoDBiPOG091H02OF

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di1.10.1060.10, 1 hit
3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR017896 4Fe4S_Fe-S-bd
IPR017900 4Fe4S_Fe_S_CS
IPR012675 Beta-grasp_dom_sf
IPR009051 Helical_ferredxn
IPR004489 Succ_DH/fum_Rdtase_Fe-S
IPR025192 Succ_DH/fum_Rdtase_N
PfamiView protein in Pfam
PF13085 Fer2_3, 1 hit
PF13183 Fer4_8, 1 hit
SUPFAMiSSF46548 SSF46548, 1 hit
SSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR00384 dhsB, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit
PS00198 4FE4S_FER_1, 1 hit
PS51379 4FE4S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

D5V6P6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDHKGREVT IKVLKFNPRS KISKPHYVEY KLEETPGMTL FIALMKIREE
60 70 80 90 100
HDADLSFDFV CRAGICGSCG MVVNGKPALA CRTLIANYPD GVITLLPMPA
110 120 130 140 150
FELIKDLSVN TGKWMDAMSN RVESWIHTNH KPDITKIEEK IDPDIADQTF
160 170 180 190 200
ELDRCIECGI CVASCGTMLM RPDFVGPVGL NRIARFEVDP HDNRTAEDFY
210 220 230 240
ELVGDDNGIF GCMSLMACED HCPKHLPLQN KIAYLRRRLV ALR
Length:243
Mass (Da):27,433
Last modified:July 13, 2010 - v1
Checksum:iBEE6A1C28FF6CB9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001999 Genomic DNA Translation: ADG94316.1
RefSeqiWP_013136461.1, NC_014166.1

Genome annotation databases

EnsemblBacteriaiADG94316; ADG94316; Arnit_2668
KEGGiant:Arnit_2668

Similar proteinsi

Entry informationi

Entry nameiD5V6P6_ARCNC
AccessioniPrimary (citable) accession number: D5V6P6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: February 28, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health