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D5V3V3 (D5V3V3_ARCNC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body By similarity. SAAS SAAS005712 HAMAP-Rule MF_01307

With S4 and S12 plays an important role in translational accuracy By similarity. SAAS SAAS005712 HAMAP-Rule MF_01307

Subunit structure

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8 By similarity. SAAS SAAS005712 HAMAP-Rule MF_01307

Domain

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity By similarity. HAMAP-Rule MF_01307

Sequence similarities

Belongs to the ribosomal protein S5P family. RuleBase RU003823 HAMAP-Rule MF_01307

Contains 1 S5 DRBM domain. SAAS SAAS005712 HAMAP-Rule MF_01307

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain9 – 7264S5 DRBM By similarity HAMAP-Rule MF_01307

Sequences

Sequence LengthMass (Da)Tools
D5V3V3 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 5F386085949196E6

FASTA14715,473
        10         20         30         40         50         60 
MAAVNREDFQ EAIVKIGRVT KVVKGGRRFR FTALVVVGDK NGTVGFGMGK AKEVPDAIKK 

        70         80         90        100        110        120 
ALDDAFKSLV KVSIHGTTIA HDIEHKYNAS KILLKPASEG TGLIAGGAAR PVLELSGVKD 

       130        140 
IIAKSLGSNN PNNLVQATVE ALARIKG

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001999 Genomic DNA. Translation: ADG92781.1.
RefSeqYP_003655288.1. NC_014166.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG92781; ADG92781; Arnit_1120.
GeneID9171278.
KEGGant:Arnit_1120.
PATRIC38114858. VBIArcNit33843_1106.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000072595.
KOK02988.

Enzyme and pathway databases

BioCycANIT572480:GJ62-1147-MONOMER.

Family and domain databases

Gene3D3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
HAMAPMF_01307_B. Ribosomal_S5_B.
InterProIPR014720. dsRNA-bd-like_dom.
IPR000851. Ribosomal_S5.
IPR005712. Ribosomal_S5_bac-type.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERPTHR13718. PTHR13718. 1 hit.
PfamPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMSSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMsTIGR01021. rpsE_bact. 1 hit.
PROSITEPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5V3V3_ARCNC
AccessionPrimary (citable) accession number: D5V3V3
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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